Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 AC007225.1-201ENST00000566331 1836 ntBASIC20.13■□□□□ 0.81
CHPFQ8IZ52 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHPFQ8IZ52 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CHPFQ8IZ52 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CHPFQ8IZ52 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.13■□□□□ 0.81
CHPFQ8IZ52 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.13■□□□□ 0.81
CHPFQ8IZ52 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHPFQ8IZ52 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CHPFQ8IZ52 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHPFQ8IZ52 MMP23A-201ENST00000234610 1017 ntBASIC20.13■□□□□ 0.81
CHPFQ8IZ52 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHPFQ8IZ52 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CHPFQ8IZ52 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.13■□□□□ 0.81
CHPFQ8IZ52 NUDT16P1-203ENST00000513809 620 ntBASIC20.13■□□□□ 0.81
CHPFQ8IZ52 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CHPFQ8IZ52 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.13■□□□□ 0.81
CHPFQ8IZ52 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.13■□□□□ 0.81
CHPFQ8IZ52 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CHPFQ8IZ52 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CHPFQ8IZ52 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.13■□□□□ 0.81
CHPFQ8IZ52 AC097493.4-201ENST00000641197 219 ntBASIC20.13■□□□□ 0.81
CHPFQ8IZ52 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHPFQ8IZ52 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.13■□□□□ 0.81
CHPFQ8IZ52 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHPFQ8IZ52 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHPFQ8IZ52 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHPFQ8IZ52 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHPFQ8IZ52 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.13■□□□□ 0.81
CHPFQ8IZ52 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
CHPFQ8IZ52 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHPFQ8IZ52 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHPFQ8IZ52 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHPFQ8IZ52 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CHPFQ8IZ52 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHPFQ8IZ52 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.12■□□□□ 0.81
CHPFQ8IZ52 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.12■□□□□ 0.81
CHPFQ8IZ52 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.12■□□□□ 0.81
CHPFQ8IZ52 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CHPFQ8IZ52 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
CHPFQ8IZ52 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHPFQ8IZ52 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.12■□□□□ 0.81
CHPFQ8IZ52 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHPFQ8IZ52 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.12■□□□□ 0.81
CHPFQ8IZ52 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CHPFQ8IZ52 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHPFQ8IZ52 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHPFQ8IZ52 AP006587.1-201ENST00000534129 1502 ntBASIC20.12■□□□□ 0.81
CHPFQ8IZ52 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHPFQ8IZ52 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.11■□□□□ 0.81
CHPFQ8IZ52 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CHPFQ8IZ52 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.11■□□□□ 0.81
CHPFQ8IZ52 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHPFQ8IZ52 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHPFQ8IZ52 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHPFQ8IZ52 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CHPFQ8IZ52 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CHPFQ8IZ52 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.11■□□□□ 0.81
CHPFQ8IZ52 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHPFQ8IZ52 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHPFQ8IZ52 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHPFQ8IZ52 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.11■□□□□ 0.81
CHPFQ8IZ52 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.11■□□□□ 0.81
CHPFQ8IZ52 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.11■□□□□ 0.81
CHPFQ8IZ52 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHPFQ8IZ52 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.11■□□□□ 0.81
CHPFQ8IZ52 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.11■□□□□ 0.81
CHPFQ8IZ52 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.11■□□□□ 0.81
CHPFQ8IZ52 CR392000.1-201ENST00000624770 1228 ntBASIC20.11■□□□□ 0.81
CHPFQ8IZ52 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.11■□□□□ 0.81
CHPFQ8IZ52 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.11■□□□□ 0.81
CHPFQ8IZ52 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHPFQ8IZ52 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CHPFQ8IZ52 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CHPFQ8IZ52 KRT16P6-202ENST00000425692 1426 ntBASIC20.1■□□□□ 0.81
CHPFQ8IZ52 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CHPFQ8IZ52 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CHPFQ8IZ52 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CHPFQ8IZ52 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHPFQ8IZ52 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CHPFQ8IZ52 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHPFQ8IZ52 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.1■□□□□ 0.81
CHPFQ8IZ52 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.1■□□□□ 0.81
CHPFQ8IZ52 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHPFQ8IZ52 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHPFQ8IZ52 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.1■□□□□ 0.81
CHPFQ8IZ52 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.1■□□□□ 0.81
CHPFQ8IZ52 AC012306.2-201ENST00000609350 630 ntBASIC20.1■□□□□ 0.81
CHPFQ8IZ52 REXO1L10P-201ENST00000615707 1290 ntBASIC20.1■□□□□ 0.81
CHPFQ8IZ52 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CHPFQ8IZ52 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CHPFQ8IZ52 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.1■□□□□ 0.81
CHPFQ8IZ52 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHPFQ8IZ52 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.1■□□□□ 0.81
CHPFQ8IZ52 AC092720.2-201ENST00000602388 1665 ntBASIC20.1■□□□□ 0.81
CHPFQ8IZ52 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
CHPFQ8IZ52 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CHPFQ8IZ52 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHPFQ8IZ52 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHPFQ8IZ52 UNC93B2-201ENST00000285383 730 ntBASIC20.09■□□□□ 0.81
CHPFQ8IZ52 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms