Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC23.19■■□□□ 1.3
RAB11FIP4Q86YS3 THEM4-205ENST00000489410 643 ntTSL 2 BASIC23.19■■□□□ 1.3
RAB11FIP4Q86YS3 AP003097.1-201ENST00000530657 1135 ntBASIC23.19■■□□□ 1.3
RAB11FIP4Q86YS3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
RAB11FIP4Q86YS3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RAB11FIP4Q86YS3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC23.19■■□□□ 1.3
RAB11FIP4Q86YS3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
RAB11FIP4Q86YS3 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC23.19■■□□□ 1.3
RAB11FIP4Q86YS3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RAB11FIP4Q86YS3 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RAB11FIP4Q86YS3 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
RAB11FIP4Q86YS3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
RAB11FIP4Q86YS3 PHGDH-210ENST00000641115 1638 ntBASIC23.19■■□□□ 1.3
RAB11FIP4Q86YS3 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC23.18■■□□□ 1.3
RAB11FIP4Q86YS3 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC23.18■■□□□ 1.3
RAB11FIP4Q86YS3 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC23.18■■□□□ 1.3
RAB11FIP4Q86YS3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RAB11FIP4Q86YS3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RAB11FIP4Q86YS3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC23.18■■□□□ 1.3
RAB11FIP4Q86YS3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RAB11FIP4Q86YS3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RAB11FIP4Q86YS3 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RAB11FIP4Q86YS3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RAB11FIP4Q86YS3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RAB11FIP4Q86YS3 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RAB11FIP4Q86YS3 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
RAB11FIP4Q86YS3 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC23.18■■□□□ 1.3
RAB11FIP4Q86YS3 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RAB11FIP4Q86YS3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC23.18■■□□□ 1.3
RAB11FIP4Q86YS3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC23.18■■□□□ 1.3
RAB11FIP4Q86YS3 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC23.18■■□□□ 1.3
RAB11FIP4Q86YS3 AC120498.8-201ENST00000614275 531 ntBASIC23.18■■□□□ 1.3
RAB11FIP4Q86YS3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RAB11FIP4Q86YS3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RAB11FIP4Q86YS3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC23.18■■□□□ 1.3
RAB11FIP4Q86YS3 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RAB11FIP4Q86YS3 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RAB11FIP4Q86YS3 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC23.18■■□□□ 1.3
RAB11FIP4Q86YS3 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
RAB11FIP4Q86YS3 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RAB11FIP4Q86YS3 AC018553.1-201ENST00000616682 1458 ntBASIC23.17■■□□□ 1.3
RAB11FIP4Q86YS3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RAB11FIP4Q86YS3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
RAB11FIP4Q86YS3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RAB11FIP4Q86YS3 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RAB11FIP4Q86YS3 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RAB11FIP4Q86YS3 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RAB11FIP4Q86YS3 MMAB-206ENST00000540016 945 ntTSL 3 BASIC23.17■■□□□ 1.3
RAB11FIP4Q86YS3 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC23.17■■□□□ 1.3
RAB11FIP4Q86YS3 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC23.17■■□□□ 1.3
RAB11FIP4Q86YS3 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC23.17■■□□□ 1.3
RAB11FIP4Q86YS3 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RAB11FIP4Q86YS3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
RAB11FIP4Q86YS3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RAB11FIP4Q86YS3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RAB11FIP4Q86YS3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RAB11FIP4Q86YS3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
RAB11FIP4Q86YS3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RAB11FIP4Q86YS3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC23.17■■□□□ 1.3
RAB11FIP4Q86YS3 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RAB11FIP4Q86YS3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC23.16■■□□□ 1.3
RAB11FIP4Q86YS3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
RAB11FIP4Q86YS3 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RAB11FIP4Q86YS3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
RAB11FIP4Q86YS3 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RAB11FIP4Q86YS3 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC23.16■■□□□ 1.3
RAB11FIP4Q86YS3 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
RAB11FIP4Q86YS3 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
RAB11FIP4Q86YS3 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
RAB11FIP4Q86YS3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RAB11FIP4Q86YS3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
RAB11FIP4Q86YS3 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC23.16■■□□□ 1.3
RAB11FIP4Q86YS3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC23.16■■□□□ 1.3
RAB11FIP4Q86YS3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC23.16■■□□□ 1.3
RAB11FIP4Q86YS3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC23.16■■□□□ 1.3
RAB11FIP4Q86YS3 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC23.15■■□□□ 1.3
RAB11FIP4Q86YS3 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RAB11FIP4Q86YS3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RAB11FIP4Q86YS3 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RAB11FIP4Q86YS3 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RAB11FIP4Q86YS3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RAB11FIP4Q86YS3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
RAB11FIP4Q86YS3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RAB11FIP4Q86YS3 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
RAB11FIP4Q86YS3 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
RAB11FIP4Q86YS3 AC026366.1-201ENST00000488803 879 ntBASIC23.15■■□□□ 1.3
RAB11FIP4Q86YS3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
RAB11FIP4Q86YS3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
RAB11FIP4Q86YS3 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
RAB11FIP4Q86YS3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC23.14■■□□□ 1.29
RAB11FIP4Q86YS3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
RAB11FIP4Q86YS3 PWWP2AP1-201ENST00000429776 2273 ntBASIC23.14■■□□□ 1.29
RAB11FIP4Q86YS3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC23.14■■□□□ 1.29
RAB11FIP4Q86YS3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RAB11FIP4Q86YS3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC23.14■■□□□ 1.29
RAB11FIP4Q86YS3 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RAB11FIP4Q86YS3 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC23.14■■□□□ 1.29
RAB11FIP4Q86YS3 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RAB11FIP4Q86YS3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC23.14■■□□□ 1.29
RAB11FIP4Q86YS3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms