Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAPH1Q70E73 KRT8P17-201ENST00000453110 1448 ntBASIC19.82■□□□□ 0.76
RAPH1Q70E73 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.82■□□□□ 0.76
RAPH1Q70E73 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RAPH1Q70E73 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAPH1Q70E73 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
RAPH1Q70E73 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.82■□□□□ 0.76
RAPH1Q70E73 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAPH1Q70E73 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAPH1Q70E73 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RAPH1Q70E73 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAPH1Q70E73 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
RAPH1Q70E73 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAPH1Q70E73 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
RAPH1Q70E73 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAPH1Q70E73 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
RAPH1Q70E73 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAPH1Q70E73 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.81■□□□□ 0.76
RAPH1Q70E73 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.81■□□□□ 0.76
RAPH1Q70E73 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
RAPH1Q70E73 AC100791.3-201ENST00000617619 330 ntBASIC19.81■□□□□ 0.76
RAPH1Q70E73 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RAPH1Q70E73 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAPH1Q70E73 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAPH1Q70E73 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.81■□□□□ 0.76
RAPH1Q70E73 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAPH1Q70E73 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAPH1Q70E73 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RAPH1Q70E73 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.8■□□□□ 0.76
RAPH1Q70E73 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAPH1Q70E73 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.8■□□□□ 0.76
RAPH1Q70E73 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAPH1Q70E73 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAPH1Q70E73 KRT16P6-202ENST00000425692 1426 ntBASIC19.8■□□□□ 0.76
RAPH1Q70E73 AC068338.2-201ENST00000563278 1430 ntBASIC19.8■□□□□ 0.76
RAPH1Q70E73 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAPH1Q70E73 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.8■□□□□ 0.76
RAPH1Q70E73 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RAPH1Q70E73 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAPH1Q70E73 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RAPH1Q70E73 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAPH1Q70E73 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.8■□□□□ 0.76
RAPH1Q70E73 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAPH1Q70E73 PTBP1P-201ENST00000554374 1601 ntBASIC19.8■□□□□ 0.76
RAPH1Q70E73 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAPH1Q70E73 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RAPH1Q70E73 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAPH1Q70E73 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAPH1Q70E73 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RAPH1Q70E73 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
RAPH1Q70E73 DUX4L16-201ENST00000555130 1264 ntBASIC19.79■□□□□ 0.76
RAPH1Q70E73 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.79■□□□□ 0.76
RAPH1Q70E73 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.79■□□□□ 0.76
RAPH1Q70E73 AC105020.6-201ENST00000621523 1217 ntBASIC19.79■□□□□ 0.76
RAPH1Q70E73 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RAPH1Q70E73 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
RAPH1Q70E73 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.79■□□□□ 0.76
RAPH1Q70E73 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAPH1Q70E73 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAPH1Q70E73 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAPH1Q70E73 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAPH1Q70E73 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RAPH1Q70E73 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.78■□□□□ 0.76
RAPH1Q70E73 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RAPH1Q70E73 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.78■□□□□ 0.76
RAPH1Q70E73 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAPH1Q70E73 KRT8P20-201ENST00000423953 1409 ntBASIC19.78■□□□□ 0.76
RAPH1Q70E73 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAPH1Q70E73 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
RAPH1Q70E73 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAPH1Q70E73 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAPH1Q70E73 KRT18P68-201ENST00000392293 1000 ntBASIC19.78■□□□□ 0.76
RAPH1Q70E73 CNN2P6-201ENST00000439038 900 ntBASIC19.78■□□□□ 0.76
RAPH1Q70E73 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.78■□□□□ 0.76
RAPH1Q70E73 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.78■□□□□ 0.76
RAPH1Q70E73 AL031963.3-201ENST00000606441 850 ntBASIC19.78■□□□□ 0.76
RAPH1Q70E73 AC011767.1-201ENST00000617410 1153 ntBASIC19.78■□□□□ 0.76
RAPH1Q70E73 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAPH1Q70E73 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAPH1Q70E73 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.78■□□□□ 0.76
RAPH1Q70E73 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RAPH1Q70E73 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAPH1Q70E73 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAPH1Q70E73 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAPH1Q70E73 TREX1-205ENST00000625293 1783 ntBASIC19.78■□□□□ 0.76
RAPH1Q70E73 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAPH1Q70E73 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAPH1Q70E73 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAPH1Q70E73 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RAPH1Q70E73 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.77■□□□□ 0.76
RAPH1Q70E73 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.77■□□□□ 0.76
RAPH1Q70E73 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.77■□□□□ 0.76
RAPH1Q70E73 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RAPH1Q70E73 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RAPH1Q70E73 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAPH1Q70E73 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RAPH1Q70E73 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAPH1Q70E73 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAPH1Q70E73 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAPH1Q70E73 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms