Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.01■□□□□ 0.47
TMEM53Q6P2H8 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
TMEM53Q6P2H8 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
TMEM53Q6P2H8 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM53Q6P2H8 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM53Q6P2H8 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM53Q6P2H8 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM53Q6P2H8 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM53Q6P2H8 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM53Q6P2H8 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM53Q6P2H8 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM53Q6P2H8 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TMEM53Q6P2H8 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM53Q6P2H8 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM53Q6P2H8 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TMEM53Q6P2H8 AP005212.1-201ENST00000581547 1997 ntBASIC18■□□□□ 0.47
TMEM53Q6P2H8 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
TMEM53Q6P2H8 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18■□□□□ 0.47
TMEM53Q6P2H8 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TMEM53Q6P2H8 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TMEM53Q6P2H8 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18■□□□□ 0.47
TMEM53Q6P2H8 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TMEM53Q6P2H8 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TMEM53Q6P2H8 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18■□□□□ 0.47
TMEM53Q6P2H8 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TMEM53Q6P2H8 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18■□□□□ 0.47
TMEM53Q6P2H8 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18■□□□□ 0.47
TMEM53Q6P2H8 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18■□□□□ 0.47
TMEM53Q6P2H8 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TMEM53Q6P2H8 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
TMEM53Q6P2H8 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TMEM53Q6P2H8 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TMEM53Q6P2H8 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TMEM53Q6P2H8 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18■□□□□ 0.47
TMEM53Q6P2H8 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18■□□□□ 0.47
TMEM53Q6P2H8 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18■□□□□ 0.47
TMEM53Q6P2H8 AL162412.1-201ENST00000567129 965 ntBASIC18■□□□□ 0.47
TMEM53Q6P2H8 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18■□□□□ 0.47
TMEM53Q6P2H8 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18■□□□□ 0.47
TMEM53Q6P2H8 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TMEM53Q6P2H8 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18■□□□□ 0.47
TMEM53Q6P2H8 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18■□□□□ 0.47
TMEM53Q6P2H8 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TMEM53Q6P2H8 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TMEM53Q6P2H8 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TMEM53Q6P2H8 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
TMEM53Q6P2H8 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18■□□□□ 0.47
TMEM53Q6P2H8 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18■□□□□ 0.47
TMEM53Q6P2H8 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM53Q6P2H8 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM53Q6P2H8 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM53Q6P2H8 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM53Q6P2H8 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TMEM53Q6P2H8 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM53Q6P2H8 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM53Q6P2H8 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM53Q6P2H8 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM53Q6P2H8 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.99■□□□□ 0.47
TMEM53Q6P2H8 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.99■□□□□ 0.47
TMEM53Q6P2H8 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.99■□□□□ 0.47
TMEM53Q6P2H8 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.99■□□□□ 0.47
TMEM53Q6P2H8 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
TMEM53Q6P2H8 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.99■□□□□ 0.47
TMEM53Q6P2H8 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.99■□□□□ 0.47
TMEM53Q6P2H8 AC008694.1-202ENST00000636953 945 ntBASIC17.99■□□□□ 0.47
TMEM53Q6P2H8 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
TMEM53Q6P2H8 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM53Q6P2H8 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM53Q6P2H8 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM53Q6P2H8 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.99■□□□□ 0.47
TMEM53Q6P2H8 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM53Q6P2H8 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TMEM53Q6P2H8 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM53Q6P2H8 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
TMEM53Q6P2H8 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM53Q6P2H8 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM53Q6P2H8 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TMEM53Q6P2H8 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
TMEM53Q6P2H8 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM53Q6P2H8 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
TMEM53Q6P2H8 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM53Q6P2H8 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM53Q6P2H8 AC099398.1-201ENST00000567919 2776 ntBASIC17.98■□□□□ 0.47
TMEM53Q6P2H8 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM53Q6P2H8 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TMEM53Q6P2H8 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM53Q6P2H8 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.98■□□□□ 0.47
TMEM53Q6P2H8 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM53Q6P2H8 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM53Q6P2H8 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TMEM53Q6P2H8 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM53Q6P2H8 CNN2P6-201ENST00000439038 900 ntBASIC17.98■□□□□ 0.47
TMEM53Q6P2H8 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.98■□□□□ 0.47
TMEM53Q6P2H8 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.98■□□□□ 0.47
TMEM53Q6P2H8 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.98■□□□□ 0.47
TMEM53Q6P2H8 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.98■□□□□ 0.47
TMEM53Q6P2H8 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.98■□□□□ 0.47
TMEM53Q6P2H8 FAM21FP-204ENST00000608637 956 ntBASIC17.98■□□□□ 0.47
TMEM53Q6P2H8 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM53Q6P2H8 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms