Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LYSMD4Q5XG99 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LYSMD4Q5XG99 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LYSMD4Q5XG99 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LYSMD4Q5XG99 RNF152P1-201ENST00000397754 604 ntBASIC19.45■□□□□ 0.7
LYSMD4Q5XG99 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LYSMD4Q5XG99 MFAP1P1-201ENST00000442257 1255 ntBASIC19.45■□□□□ 0.7
LYSMD4Q5XG99 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LYSMD4Q5XG99 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.45■□□□□ 0.7
LYSMD4Q5XG99 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
LYSMD4Q5XG99 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.45■□□□□ 0.7
LYSMD4Q5XG99 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LYSMD4Q5XG99 AC139887.4-201ENST00000607877 719 ntBASIC19.45■□□□□ 0.7
LYSMD4Q5XG99 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LYSMD4Q5XG99 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LYSMD4Q5XG99 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LYSMD4Q5XG99 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LYSMD4Q5XG99 FP700111.2-201ENST00000619190 1892 ntBASIC19.45■□□□□ 0.7
LYSMD4Q5XG99 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LYSMD4Q5XG99 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LYSMD4Q5XG99 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LYSMD4Q5XG99 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
LYSMD4Q5XG99 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.44■□□□□ 0.7
LYSMD4Q5XG99 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LYSMD4Q5XG99 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
LYSMD4Q5XG99 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LYSMD4Q5XG99 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.44■□□□□ 0.7
LYSMD4Q5XG99 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.44■□□□□ 0.7
LYSMD4Q5XG99 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LYSMD4Q5XG99 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
LYSMD4Q5XG99 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LYSMD4Q5XG99 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LYSMD4Q5XG99 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LYSMD4Q5XG99 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
LYSMD4Q5XG99 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LYSMD4Q5XG99 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.44■□□□□ 0.7
LYSMD4Q5XG99 FAM8A6P-201ENST00000407496 1135 ntBASIC19.44■□□□□ 0.7
LYSMD4Q5XG99 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
LYSMD4Q5XG99 FAM207BP-201ENST00000447172 505 ntBASIC19.44■□□□□ 0.7
LYSMD4Q5XG99 AC092647.4-201ENST00000457211 535 ntBASIC19.44■□□□□ 0.7
LYSMD4Q5XG99 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.44■□□□□ 0.7
LYSMD4Q5XG99 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LYSMD4Q5XG99 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LYSMD4Q5XG99 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
LYSMD4Q5XG99 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.44■□□□□ 0.7
LYSMD4Q5XG99 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LYSMD4Q5XG99 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
LYSMD4Q5XG99 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.44■□□□□ 0.7
LYSMD4Q5XG99 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LYSMD4Q5XG99 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LYSMD4Q5XG99 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LYSMD4Q5XG99 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.44■□□□□ 0.7
LYSMD4Q5XG99 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LYSMD4Q5XG99 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.44■□□□□ 0.7
LYSMD4Q5XG99 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LYSMD4Q5XG99 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
LYSMD4Q5XG99 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LYSMD4Q5XG99 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LYSMD4Q5XG99 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LYSMD4Q5XG99 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LYSMD4Q5XG99 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LYSMD4Q5XG99 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LYSMD4Q5XG99 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LYSMD4Q5XG99 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LYSMD4Q5XG99 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LYSMD4Q5XG99 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LYSMD4Q5XG99 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LYSMD4Q5XG99 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LYSMD4Q5XG99 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.43■□□□□ 0.7
LYSMD4Q5XG99 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.43■□□□□ 0.7
LYSMD4Q5XG99 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LYSMD4Q5XG99 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.43■□□□□ 0.7
LYSMD4Q5XG99 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.43■□□□□ 0.7
LYSMD4Q5XG99 AL138966.2-201ENST00000621997 464 ntBASIC19.43■□□□□ 0.7
LYSMD4Q5XG99 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LYSMD4Q5XG99 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LYSMD4Q5XG99 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LYSMD4Q5XG99 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
LYSMD4Q5XG99 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LYSMD4Q5XG99 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.43■□□□□ 0.7
LYSMD4Q5XG99 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.43■□□□□ 0.7
LYSMD4Q5XG99 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.43■□□□□ 0.7
LYSMD4Q5XG99 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LYSMD4Q5XG99 AC096733.2-201ENST00000609937 1394 ntBASIC19.43■□□□□ 0.7
LYSMD4Q5XG99 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LYSMD4Q5XG99 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.42■□□□□ 0.7
LYSMD4Q5XG99 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.42■□□□□ 0.7
LYSMD4Q5XG99 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LYSMD4Q5XG99 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LYSMD4Q5XG99 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LYSMD4Q5XG99 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LYSMD4Q5XG99 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.42■□□□□ 0.7
LYSMD4Q5XG99 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LYSMD4Q5XG99 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LYSMD4Q5XG99 SLC25A1P2-201ENST00000430693 912 ntBASIC19.42■□□□□ 0.7
LYSMD4Q5XG99 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.42■□□□□ 0.7
LYSMD4Q5XG99 AC091390.4-202ENST00000476426 537 ntBASIC19.42■□□□□ 0.7
LYSMD4Q5XG99 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LYSMD4Q5XG99 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.42■□□□□ 0.7
LYSMD4Q5XG99 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms