Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDKAL1Q5VV42 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDKAL1Q5VV42 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDKAL1Q5VV42 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDKAL1Q5VV42 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDKAL1Q5VV42 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CDKAL1Q5VV42 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.65■■□□□ 1.06
CDKAL1Q5VV42 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDKAL1Q5VV42 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CDKAL1Q5VV42 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDKAL1Q5VV42 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDKAL1Q5VV42 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
CDKAL1Q5VV42 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CDKAL1Q5VV42 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDKAL1Q5VV42 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.64■■□□□ 1.06
CDKAL1Q5VV42 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
CDKAL1Q5VV42 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CDKAL1Q5VV42 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.64■■□□□ 1.05
CDKAL1Q5VV42 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.64■■□□□ 1.05
CDKAL1Q5VV42 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.64■■□□□ 1.05
CDKAL1Q5VV42 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CDKAL1Q5VV42 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.64■■□□□ 1.05
CDKAL1Q5VV42 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDKAL1Q5VV42 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDKAL1Q5VV42 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDKAL1Q5VV42 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDKAL1Q5VV42 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.64■■□□□ 1.05
CDKAL1Q5VV42 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDKAL1Q5VV42 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.64■■□□□ 1.05
CDKAL1Q5VV42 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CDKAL1Q5VV42 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDKAL1Q5VV42 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CDKAL1Q5VV42 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDKAL1Q5VV42 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDKAL1Q5VV42 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDKAL1Q5VV42 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDKAL1Q5VV42 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.63■■□□□ 1.05
CDKAL1Q5VV42 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDKAL1Q5VV42 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDKAL1Q5VV42 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CDKAL1Q5VV42 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDKAL1Q5VV42 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDKAL1Q5VV42 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.63■■□□□ 1.05
CDKAL1Q5VV42 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.63■■□□□ 1.05
CDKAL1Q5VV42 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.63■■□□□ 1.05
CDKAL1Q5VV42 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDKAL1Q5VV42 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDKAL1Q5VV42 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDKAL1Q5VV42 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDKAL1Q5VV42 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.62■■□□□ 1.05
CDKAL1Q5VV42 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDKAL1Q5VV42 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDKAL1Q5VV42 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDKAL1Q5VV42 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CDKAL1Q5VV42 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.62■■□□□ 1.05
CDKAL1Q5VV42 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDKAL1Q5VV42 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.62■■□□□ 1.05
CDKAL1Q5VV42 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDKAL1Q5VV42 AC018553.1-201ENST00000616682 1458 ntBASIC21.62■■□□□ 1.05
CDKAL1Q5VV42 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDKAL1Q5VV42 LINC01465-201ENST00000408887 1940 ntBASIC21.62■■□□□ 1.05
CDKAL1Q5VV42 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.62■■□□□ 1.05
CDKAL1Q5VV42 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDKAL1Q5VV42 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDKAL1Q5VV42 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
CDKAL1Q5VV42 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.62■■□□□ 1.05
CDKAL1Q5VV42 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CDKAL1Q5VV42 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDKAL1Q5VV42 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.61■■□□□ 1.05
CDKAL1Q5VV42 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDKAL1Q5VV42 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.61■■□□□ 1.05
CDKAL1Q5VV42 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDKAL1Q5VV42 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CDKAL1Q5VV42 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
CDKAL1Q5VV42 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDKAL1Q5VV42 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.61■■□□□ 1.05
CDKAL1Q5VV42 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDKAL1Q5VV42 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.61■■□□□ 1.05
CDKAL1Q5VV42 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDKAL1Q5VV42 RARRES2P6-201ENST00000567333 442 ntBASIC21.61■■□□□ 1.05
CDKAL1Q5VV42 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDKAL1Q5VV42 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDKAL1Q5VV42 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC21.61■■□□□ 1.05
CDKAL1Q5VV42 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDKAL1Q5VV42 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.61■■□□□ 1.05
CDKAL1Q5VV42 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.61■■□□□ 1.05
CDKAL1Q5VV42 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDKAL1Q5VV42 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDKAL1Q5VV42 AC116351.2-201ENST00000606540 1585 ntBASIC21.61■■□□□ 1.05
CDKAL1Q5VV42 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
CDKAL1Q5VV42 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.61■■□□□ 1.05
CDKAL1Q5VV42 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.6■■□□□ 1.05
CDKAL1Q5VV42 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDKAL1Q5VV42 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CDKAL1Q5VV42 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDKAL1Q5VV42 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.6■■□□□ 1.05
CDKAL1Q5VV42 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDKAL1Q5VV42 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDKAL1Q5VV42 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CDKAL1Q5VV42 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms