Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LDLRAP1Q5SW96 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.65■□□□□ 0.74
LDLRAP1Q5SW96 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.65■□□□□ 0.74
LDLRAP1Q5SW96 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
LDLRAP1Q5SW96 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.65■□□□□ 0.74
LDLRAP1Q5SW96 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.65■□□□□ 0.74
LDLRAP1Q5SW96 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LDLRAP1Q5SW96 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
LDLRAP1Q5SW96 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
LDLRAP1Q5SW96 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LDLRAP1Q5SW96 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LDLRAP1Q5SW96 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
LDLRAP1Q5SW96 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
LDLRAP1Q5SW96 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.64■□□□□ 0.74
LDLRAP1Q5SW96 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.64■□□□□ 0.73
LDLRAP1Q5SW96 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
LDLRAP1Q5SW96 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.64■□□□□ 0.73
LDLRAP1Q5SW96 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.64■□□□□ 0.73
LDLRAP1Q5SW96 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LDLRAP1Q5SW96 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.64■□□□□ 0.73
LDLRAP1Q5SW96 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.64■□□□□ 0.73
LDLRAP1Q5SW96 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.64■□□□□ 0.73
LDLRAP1Q5SW96 AC069544.1-201ENST00000609399 999 ntBASIC19.64■□□□□ 0.73
LDLRAP1Q5SW96 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LDLRAP1Q5SW96 AL121829.2-201ENST00000620908 328 ntBASIC19.64■□□□□ 0.73
LDLRAP1Q5SW96 ITM2C-210ENST00000620962 501 ntBASIC19.64■□□□□ 0.73
LDLRAP1Q5SW96 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.64■□□□□ 0.73
LDLRAP1Q5SW96 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LDLRAP1Q5SW96 AC124283.5-201ENST00000624661 1809 ntBASIC19.64■□□□□ 0.73
LDLRAP1Q5SW96 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LDLRAP1Q5SW96 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LDLRAP1Q5SW96 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.64■□□□□ 0.73
LDLRAP1Q5SW96 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LDLRAP1Q5SW96 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.64■□□□□ 0.73
LDLRAP1Q5SW96 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
LDLRAP1Q5SW96 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LDLRAP1Q5SW96 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
LDLRAP1Q5SW96 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LDLRAP1Q5SW96 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LDLRAP1Q5SW96 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
LDLRAP1Q5SW96 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LDLRAP1Q5SW96 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LDLRAP1Q5SW96 ABHD17AP1-201ENST00000358206 933 ntBASIC19.63■□□□□ 0.73
LDLRAP1Q5SW96 AC128676.1-201ENST00000454392 318 ntBASIC19.63■□□□□ 0.73
LDLRAP1Q5SW96 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LDLRAP1Q5SW96 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.63■□□□□ 0.73
LDLRAP1Q5SW96 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.63■□□□□ 0.73
LDLRAP1Q5SW96 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LDLRAP1Q5SW96 AC073648.6-201ENST00000641589 218 ntBASIC19.63■□□□□ 0.73
LDLRAP1Q5SW96 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
LDLRAP1Q5SW96 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LDLRAP1Q5SW96 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LDLRAP1Q5SW96 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LDLRAP1Q5SW96 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LDLRAP1Q5SW96 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LDLRAP1Q5SW96 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
LDLRAP1Q5SW96 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LDLRAP1Q5SW96 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LDLRAP1Q5SW96 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LDLRAP1Q5SW96 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LDLRAP1Q5SW96 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LDLRAP1Q5SW96 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LDLRAP1Q5SW96 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LDLRAP1Q5SW96 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LDLRAP1Q5SW96 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LDLRAP1Q5SW96 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
LDLRAP1Q5SW96 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LDLRAP1Q5SW96 KRT18P29-201ENST00000397031 1267 ntBASIC19.62■□□□□ 0.73
LDLRAP1Q5SW96 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.62■□□□□ 0.73
LDLRAP1Q5SW96 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LDLRAP1Q5SW96 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.62■□□□□ 0.73
LDLRAP1Q5SW96 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
LDLRAP1Q5SW96 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
LDLRAP1Q5SW96 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LDLRAP1Q5SW96 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.62■□□□□ 0.73
LDLRAP1Q5SW96 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
LDLRAP1Q5SW96 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LDLRAP1Q5SW96 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
LDLRAP1Q5SW96 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LDLRAP1Q5SW96 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LDLRAP1Q5SW96 AC116351.2-201ENST00000606540 1585 ntBASIC19.61■□□□□ 0.73
LDLRAP1Q5SW96 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LDLRAP1Q5SW96 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LDLRAP1Q5SW96 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LDLRAP1Q5SW96 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.61■□□□□ 0.73
LDLRAP1Q5SW96 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
LDLRAP1Q5SW96 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LDLRAP1Q5SW96 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LDLRAP1Q5SW96 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
LDLRAP1Q5SW96 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.61■□□□□ 0.73
LDLRAP1Q5SW96 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LDLRAP1Q5SW96 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.61■□□□□ 0.73
LDLRAP1Q5SW96 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.61■□□□□ 0.73
LDLRAP1Q5SW96 PRKY-204ENST00000533551 1019 ntBASIC19.61■□□□□ 0.73
LDLRAP1Q5SW96 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LDLRAP1Q5SW96 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.61■□□□□ 0.73
LDLRAP1Q5SW96 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
LDLRAP1Q5SW96 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.61■□□□□ 0.73
LDLRAP1Q5SW96 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LDLRAP1Q5SW96 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms