Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 DHRS2-203ENST00000432832 834 ntTSL 218.56■□□□□ 0.566e-12■■□□□ 13.6
SRSF1Q07955 DHRS2-205ENST00000553896 1352 ntTSL 1 (best)18.08■□□□□ 0.496e-12■■□□□ 13.6
SRSF1Q07955 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.086e-12■■□□□ 13.6
SRSF1Q07955 DHRS2-208ENST00000556729 5318 ntTSL 213.33□□□□□ -0.286e-12■■□□□ 13.6
SRSF1Q07955 DHRS2-207ENST00000556701 3157 ntTSL 1 (best)11.34□□□□□ -0.596e-12■■□□□ 13.6
SRSF1Q07955 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.684e-6■■□□□ 13.5
SRSF1Q07955 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.814e-6■■□□□ 13.5
SRSF1Q07955 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.51■□□□□ 0.551e-6■■□□□ 13.5
SRSF1Q07955 C22orf34-202ENST00000400023 1469 ntTSL 1 (best)14.41□□□□□ -0.11e-6■■□□□ 13.5
SRSF1Q07955 GOLGA4-207ENST00000437131 6947 ntTSL 1 (best)2□□□□□ -2.092e-6■■□□□ 13.5
SRSF1Q07955 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC12.92□□□□□ -0.341e-7■■□□□ 13.5
SRSF1Q07955 ARL15-205ENST00000507646 578 ntTSL 5 BASIC11.38□□□□□ -0.591e-7■■□□□ 13.5
SRSF1Q07955 ARL15-204ENST00000505630 628 ntTSL 1 (best)11.38□□□□□ -0.591e-7■■□□□ 13.5
SRSF1Q07955 ARL15-206ENST00000510591 804 ntTSL 54.09□□□□□ -1.751e-7■■□□□ 13.5
SRSF1Q07955 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.761e-7■■□□□ 13.5
SRSF1Q07955 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.761e-7■■□□□ 13.5
SRSF1Q07955 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.643e-7■■□□□ 13.5
SRSF1Q07955 CDK5RAP3-204ENST00000577664 568 ntTSL 411.2□□□□□ -0.626e-7■■□□□ 13.5
SRSF1Q07955 CDK5RAP3-208ENST00000578525 564 ntTSL 47.02□□□□□ -1.296e-7■■□□□ 13.5
SRSF1Q07955 UBE2J2-207ENST00000435198 1056 ntTSL 325.5■■□□□ 1.671e-6■■□□□ 13.5
SRSF1Q07955 CRACR2B-204ENST00000527089 824 ntTSL 322.59■■□□□ 1.211e-6■■□□□ 13.5
SRSF1Q07955 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC22.08■■□□□ 1.134e-8■■□□□ 13.5
SRSF1Q07955 SCLY-211ENST00000443532 968 ntTSL 521.88■■□□□ 1.093e-8■■□□□ 13.5
SRSF1Q07955 CRACR2B-214ENST00000534606 627 ntTSL 321.86■■□□□ 1.091e-6■■□□□ 13.5
SRSF1Q07955 UBE2J2-210ENST00000464036 1256 ntTSL 321.83■■□□□ 1.091e-6■■□□□ 13.5
SRSF1Q07955 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 11e-6■■□□□ 13.5
SRSF1Q07955 UBE2J2-219ENST00000503294 814 ntTSL 420.98■□□□□ 0.951e-6■■□□□ 13.5
SRSF1Q07955 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.934e-8■■□□□ 13.5
SRSF1Q07955 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.67■□□□□ 0.95e-8■■□□□ 13.5
SRSF1Q07955 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.885e-8■■□□□ 13.5
SRSF1Q07955 SCLY-204ENST00000413463 542 ntTSL 520.08■□□□□ 0.813e-8■■□□□ 13.5
SRSF1Q07955 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.721e-6■■□□□ 13.5
SRSF1Q07955 UBE2J2-214ENST00000473215 1028 ntTSL 319.47■□□□□ 0.711e-6■■□□□ 13.5
SRSF1Q07955 ESS2-203ENST00000469466 581 ntTSL 318.43■□□□□ 0.541e-6■■□□□ 13.5
SRSF1Q07955 UBE2J2-211ENST00000466752 886 ntTSL 318.12■□□□□ 0.491e-6■■□□□ 13.5
SRSF1Q07955 ARVCF-206ENST00000467828 258 ntTSL 318.12■□□□□ 0.491e-6■■□□□ 13.5
SRSF1Q07955 UBE2J2-217ENST00000491779 611 ntTSL 218.12■□□□□ 0.491e-6■■□□□ 13.5
SRSF1Q07955 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.02■□□□□ 0.481e-6■■□□□ 13.5
SRSF1Q07955 TXNRD2-209ENST00000474308 1854 ntTSL 217.65■□□□□ 0.424e-8■■□□□ 13.5
SRSF1Q07955 UBE2J2-220ENST00000509720 472 ntTSL 317.48■□□□□ 0.391e-6■■□□□ 13.5
SRSF1Q07955 EGFL7-207ENST00000492862 723 ntTSL 517.44■□□□□ 0.381e-6■■□□□ 13.5
SRSF1Q07955 UBE2J2-208ENST00000450390 2455 ntTSL 517.29■□□□□ 0.361e-6■■□□□ 13.5
SRSF1Q07955 CRACR2B-209ENST00000530183 530 ntTSL 517.11■□□□□ 0.331e-6■■□□□ 13.5
SRSF1Q07955 CRACR2B-206ENST00000528315 575 ntTSL 317.11■□□□□ 0.331e-6■■□□□ 13.5
SRSF1Q07955 CRACR2B-211ENST00000530737 834 ntTSL 317.09■□□□□ 0.331e-6■■□□□ 13.5
SRSF1Q07955 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.03■□□□□ 0.325e-8■■□□□ 13.5
SRSF1Q07955 ARVCF-209ENST00000487793 863 ntTSL 216.94■□□□□ 0.31e-6■■□□□ 13.5
SRSF1Q07955 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.284e-8■■□□□ 13.5
SRSF1Q07955 DPH7-213ENST00000491359 999 ntTSL 216.68■□□□□ 0.261e-6■■□□□ 13.5
SRSF1Q07955 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.193e-8■■□□□ 13.5
SRSF1Q07955 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC16.02■□□□□ 0.151e-6■■□□□ 13.5
SRSF1Q07955 EGFL7-205ENST00000490469 456 ntTSL 515.99■□□□□ 0.151e-6■■□□□ 13.5
SRSF1Q07955 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.91■□□□□ 0.141e-6■■□□□ 13.5
SRSF1Q07955 SCLY-209ENST00000437134 760 ntTSL 515.89■□□□□ 0.133e-8■■□□□ 13.5
SRSF1Q07955 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.131e-6■■□□□ 13.5
SRSF1Q07955 CACTIN-205ENST00000587175 2216 ntTSL 515.74■□□□□ 0.111e-6■■□□□ 13.5
SRSF1Q07955 SCLY-203ENST00000412508 585 ntTSL 215.67■□□□□ 0.13e-8■■□□□ 13.5
SRSF1Q07955 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.051e-6■■□□□ 13.5
SRSF1Q07955 ARVCF-207ENST00000473551 2108 ntTSL 215.29■□□□□ 0.041e-6■■□□□ 13.5
SRSF1Q07955 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.014e-8■■□□□ 13.5
SRSF1Q07955 CRACR2B-212ENST00000533803 742 ntTSL 215□□□□□ -0.011e-6■■□□□ 13.5
SRSF1Q07955 UBE2J2-215ENST00000477894 767 ntTSL 514.95□□□□□ -0.021e-6■■□□□ 13.5
SRSF1Q07955 BLMH-202ENST00000577290 586 ntTSL 414.84□□□□□ -0.031e-6■■□□□ 13.5
SRSF1Q07955 SCLY-206ENST00000423324 628 ntTSL 414.4□□□□□ -0.13e-8■■□□□ 13.5
SRSF1Q07955 SCLY-207ENST00000431487 568 ntTSL 514.4□□□□□ -0.13e-8■■□□□ 13.5
SRSF1Q07955 CRACR2B-213ENST00000534191 1154 ntTSL 214.26□□□□□ -0.131e-6■■□□□ 13.5
SRSF1Q07955 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.151e-6■■□□□ 13.5
SRSF1Q07955 CACTIN-204ENST00000585942 2810 ntTSL 1 (best)14.05□□□□□ -0.161e-6■■□□□ 13.5
SRSF1Q07955 BLMH-212ENST00000582749 769 ntTSL 214.04□□□□□ -0.161e-6■■□□□ 13.5
SRSF1Q07955 DGCR8-206ENST00000485802 555 ntTSL 513.71□□□□□ -0.211e-6■■□□□ 13.5
SRSF1Q07955 SCLY-217ENST00000482031 1038 ntTSL 313.64□□□□□ -0.233e-8■■□□□ 13.5
SRSF1Q07955 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC13.51□□□□□ -0.254e-8■■□□□ 13.5
SRSF1Q07955 ARVCF-205ENST00000462319 433 ntTSL 313.28□□□□□ -0.281e-6■■□□□ 13.5
SRSF1Q07955 ARVCF-210ENST00000492625 631 ntTSL 313.09□□□□□ -0.311e-6■■□□□ 13.5
SRSF1Q07955 NSUN2-203ENST00000504374 3217 ntTSL 213.06□□□□□ -0.321e-6■■□□□ 13.5
SRSF1Q07955 SNHG17-207ENST00000449469 2138 ntTSL 212.94□□□□□ -0.341e-9■■□□□ 13.5
SRSF1Q07955 SCLY-213ENST00000450965 1918 ntTSL 1 (best)12.91□□□□□ -0.343e-8■■□□□ 13.5
SRSF1Q07955 CBFA2T3-210ENST00000569464 1327 ntTSL 1 (best)12.87□□□□□ -0.351e-6■■□□□ 13.5
SRSF1Q07955 BLMH-209ENST00000580709 561 ntTSL 412.81□□□□□ -0.361e-6■■□□□ 13.5
SRSF1Q07955 DGCR8-208ENST00000495351 508 ntTSL 412.72□□□□□ -0.371e-6■■□□□ 13.5
SRSF1Q07955 BLMH-205ENST00000578090 1483 ntTSL 212.7□□□□□ -0.381e-6■■□□□ 13.5
SRSF1Q07955 TXNRD2-215ENST00000494454 2004 ntTSL 1 (best)12.57□□□□□ -0.44e-8■■□□□ 13.5
SRSF1Q07955 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.421e-6■■□□□ 13.5
SRSF1Q07955 SCLY-210ENST00000440143 415 ntTSL 312.16□□□□□ -0.463e-8■■□□□ 13.5
SRSF1Q07955 SCLY-215ENST00000480357 5668 ntTSL 1 (best)12.15□□□□□ -0.463e-8■■□□□ 13.5
SRSF1Q07955 BLMH-204ENST00000577623 823 ntTSL 511.92□□□□□ -0.51e-6■■□□□ 13.5
SRSF1Q07955 NUP214-222ENST00000530630 536 ntTSL 311.75□□□□□ -0.531e-6■■□□□ 13.5
SRSF1Q07955 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.541e-6■■□□□ 13.5
SRSF1Q07955 AP000781.2-201ENST00000534081 1639 ntTSL 211.69□□□□□ -0.541e-6■■□□□ 13.5
SRSF1Q07955 BLMH-213ENST00000584603 1020 ntTSL 511.68□□□□□ -0.541e-6■■□□□ 13.5
SRSF1Q07955 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC11.62□□□□□ -0.553e-8■■□□□ 13.5
SRSF1Q07955 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.581e-6■■□□□ 13.5
SRSF1Q07955 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.611e-6■■□□□ 13.5
SRSF1Q07955 ARFGAP2-208ENST00000525635 451 ntTSL 211.2□□□□□ -0.621e-6■■□□□ 13.5
SRSF1Q07955 TRAF4-208ENST00000469529 788 ntTSL 211.06□□□□□ -0.641e-6■■□□□ 13.5
SRSF1Q07955 SLC43A3-205ENST00000525205 862 ntTSL 310.62□□□□□ -0.711e-6■■□□□ 13.5
SRSF1Q07955 UBE2F-SCLY-202ENST00000449891 2902 ntAPPRIS ALT2 TSL 210.06□□□□□ -0.83e-8■■□□□ 13.5
SRSF1Q07955 STAT2-207ENST00000556539 3278 ntTSL 1 (best)9.98□□□□□ -0.811e-6■■□□□ 13.5
SRSF1Q07955 THAP9-AS1-202ENST00000504520 2770 ntTSL 1 (best) BASIC9.56□□□□□ -0.881e-6■■□□□ 13.5
SRSF1Q07955 ARFGAP2-213ENST00000527776 709 ntTSL 29.5□□□□□ -0.891e-6■■□□□ 13.5
Retrieved 100 of 14,836 protein–RNA pairs in 179.2 ms