Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.27■□□□□ 0.68
YBX1P67809 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.27■□□□□ 0.68
YBX1P67809 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
YBX1P67809 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
YBX1P67809 AL031963.3-201ENST00000606441 850 ntBASIC19.27■□□□□ 0.68
YBX1P67809 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
YBX1P67809 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
YBX1P67809 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
YBX1P67809 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
YBX1P67809 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
YBX1P67809 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
YBX1P67809 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
YBX1P67809 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
YBX1P67809 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.27■□□□□ 0.67
YBX1P67809 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
YBX1P67809 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
YBX1P67809 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
YBX1P67809 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
YBX1P67809 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
YBX1P67809 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
YBX1P67809 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
YBX1P67809 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
YBX1P67809 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.26■□□□□ 0.67
YBX1P67809 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
YBX1P67809 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
YBX1P67809 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
YBX1P67809 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
YBX1P67809 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.26■□□□□ 0.67
YBX1P67809 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.26■□□□□ 0.67
YBX1P67809 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.26■□□□□ 0.67
YBX1P67809 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
YBX1P67809 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.26■□□□□ 0.67
YBX1P67809 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.26■□□□□ 0.67
YBX1P67809 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.26■□□□□ 0.67
YBX1P67809 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
YBX1P67809 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.26■□□□□ 0.67
YBX1P67809 BX119927.1-201ENST00000636596 1552 ntBASIC19.26■□□□□ 0.67
YBX1P67809 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
YBX1P67809 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
YBX1P67809 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.26■□□□□ 0.67
YBX1P67809 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.26■□□□□ 0.67
YBX1P67809 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
YBX1P67809 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
YBX1P67809 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
YBX1P67809 KRT8P20-201ENST00000423953 1409 ntBASIC19.25■□□□□ 0.67
YBX1P67809 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
YBX1P67809 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
YBX1P67809 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
YBX1P67809 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
YBX1P67809 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
YBX1P67809 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
YBX1P67809 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
YBX1P67809 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
YBX1P67809 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.25■□□□□ 0.67
YBX1P67809 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
YBX1P67809 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
YBX1P67809 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.25■□□□□ 0.67
YBX1P67809 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
YBX1P67809 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
YBX1P67809 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
YBX1P67809 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
YBX1P67809 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
YBX1P67809 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
YBX1P67809 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.25■□□□□ 0.67
YBX1P67809 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.25■□□□□ 0.67
YBX1P67809 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.25■□□□□ 0.67
YBX1P67809 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.25■□□□□ 0.67
YBX1P67809 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.25■□□□□ 0.67
YBX1P67809 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.25■□□□□ 0.67
YBX1P67809 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
YBX1P67809 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.25■□□□□ 0.67
YBX1P67809 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
YBX1P67809 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
YBX1P67809 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
YBX1P67809 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
YBX1P67809 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
YBX1P67809 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.25■□□□□ 0.67
YBX1P67809 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
YBX1P67809 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.25■□□□□ 0.67
YBX1P67809 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.25■□□□□ 0.67
YBX1P67809 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
YBX1P67809 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
YBX1P67809 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
YBX1P67809 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
YBX1P67809 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
YBX1P67809 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
YBX1P67809 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
YBX1P67809 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
YBX1P67809 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
YBX1P67809 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
YBX1P67809 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
YBX1P67809 UNC93B4-201ENST00000505679 747 ntBASIC19.24■□□□□ 0.67
YBX1P67809 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.24■□□□□ 0.67
YBX1P67809 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
YBX1P67809 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
YBX1P67809 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
YBX1P67809 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
YBX1P67809 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
YBX1P67809 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
YBX1P67809 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms