Protein–RNA interactions for Protein: P60842

EIF4A1, Eukaryotic initiation factor 4A-I, humanhuman

Known RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1P60842 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
EIF4A1P60842 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
EIF4A1P60842 TMEM179-206ENST00000616017 1645 ntBASIC25.35■■□□□ 1.65
EIF4A1P60842 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC25.35■■□□□ 1.65
EIF4A1P60842 MESTP1-201ENST00000404287 994 ntBASIC25.35■■□□□ 1.65
EIF4A1P60842 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC25.35■■□□□ 1.65
EIF4A1P60842 LINC01023-201ENST00000606054 436 ntBASIC25.35■■□□□ 1.65
EIF4A1P60842 AC097493.4-201ENST00000641197 219 ntBASIC25.35■■□□□ 1.65
EIF4A1P60842 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
EIF4A1P60842 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
EIF4A1P60842 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
EIF4A1P60842 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
EIF4A1P60842 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC25.34■■□□□ 1.65
EIF4A1P60842 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC25.34■■□□□ 1.65
EIF4A1P60842 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
EIF4A1P60842 PPP1R14BP5-201ENST00000440334 435 ntBASIC25.34■■□□□ 1.65
EIF4A1P60842 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC25.34■■□□□ 1.65
EIF4A1P60842 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
EIF4A1P60842 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC25.34■■□□□ 1.65
EIF4A1P60842 AC133561.5-201ENST00000635547 218 ntBASIC25.34■■□□□ 1.65
EIF4A1P60842 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC25.34■■□□□ 1.65
EIF4A1P60842 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
EIF4A1P60842 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
EIF4A1P60842 AC092667.1-201ENST00000434301 2586 ntBASIC25.34■■□□□ 1.65
EIF4A1P60842 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC25.34■■□□□ 1.65
EIF4A1P60842 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC25.34■■□□□ 1.65
EIF4A1P60842 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
EIF4A1P60842 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
EIF4A1P60842 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
EIF4A1P60842 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC25.33■■□□□ 1.65
EIF4A1P60842 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
EIF4A1P60842 AL691432.2-201ENST00000607222 2038 ntBASIC25.33■■□□□ 1.65
EIF4A1P60842 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
EIF4A1P60842 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
EIF4A1P60842 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
EIF4A1P60842 KRT8P9-201ENST00000558927 1449 ntBASIC25.32■■□□□ 1.64
EIF4A1P60842 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
EIF4A1P60842 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
EIF4A1P60842 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
EIF4A1P60842 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC25.32■■□□□ 1.64
EIF4A1P60842 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC25.32■■□□□ 1.64
EIF4A1P60842 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC25.32■■□□□ 1.64
EIF4A1P60842 AP000525.1-201ENST00000608286 694 ntBASIC25.32■■□□□ 1.64
EIF4A1P60842 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC25.32■■□□□ 1.64
EIF4A1P60842 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC25.32■■□□□ 1.64
EIF4A1P60842 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC25.32■■□□□ 1.64
EIF4A1P60842 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC25.32■■□□□ 1.64
EIF4A1P60842 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
EIF4A1P60842 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
EIF4A1P60842 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
EIF4A1P60842 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
EIF4A1P60842 AL391422.3-201ENST00000603791 2761 ntBASIC25.31■■□□□ 1.64
EIF4A1P60842 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
EIF4A1P60842 MMP23A-201ENST00000234610 1017 ntBASIC25.31■■□□□ 1.64
EIF4A1P60842 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
EIF4A1P60842 AC004980.1-204ENST00000429707 299 ntBASIC25.31■■□□□ 1.64
EIF4A1P60842 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
EIF4A1P60842 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC25.31■■□□□ 1.64
EIF4A1P60842 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC25.31■■□□□ 1.64
EIF4A1P60842 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
EIF4A1P60842 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
EIF4A1P60842 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
EIF4A1P60842 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
EIF4A1P60842 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
EIF4A1P60842 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
EIF4A1P60842 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
EIF4A1P60842 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
EIF4A1P60842 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC25.31■■□□□ 1.64
EIF4A1P60842 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
EIF4A1P60842 AP001271.2-201ENST00000624018 1556 ntBASIC25.31■■□□□ 1.64
EIF4A1P60842 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
EIF4A1P60842 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
EIF4A1P60842 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC25.3■■□□□ 1.64
EIF4A1P60842 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC25.3■■□□□ 1.64
EIF4A1P60842 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC25.3■■□□□ 1.64
EIF4A1P60842 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC25.3■■□□□ 1.64
EIF4A1P60842 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC25.3■■□□□ 1.64
EIF4A1P60842 HLA-A-209ENST00000638375 975 ntBASIC25.3■■□□□ 1.64
EIF4A1P60842 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC25.3■■□□□ 1.64
EIF4A1P60842 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
EIF4A1P60842 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC25.3■■□□□ 1.64
EIF4A1P60842 CLDN5-201ENST00000403084 2357 ntBASIC25.3■■□□□ 1.64
EIF4A1P60842 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
EIF4A1P60842 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
EIF4A1P60842 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
EIF4A1P60842 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
EIF4A1P60842 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
EIF4A1P60842 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
EIF4A1P60842 EFS-203ENST00000429593 2610 ntTSL 2 BASIC25.29■■□□□ 1.64
EIF4A1P60842 UNC93B2-201ENST00000285383 730 ntBASIC25.29■■□□□ 1.64
EIF4A1P60842 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
EIF4A1P60842 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
EIF4A1P60842 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
EIF4A1P60842 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
EIF4A1P60842 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC25.29■■□□□ 1.64
EIF4A1P60842 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC25.29■■□□□ 1.64
EIF4A1P60842 AL031985.4-201ENST00000642138 673 ntBASIC25.29■■□□□ 1.64
EIF4A1P60842 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC25.29■■□□□ 1.64
EIF4A1P60842 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
EIF4A1P60842 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms