Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
AP3S2P59780 SNX3-202ENST00000349379 890 ntTSL 2 BASIC16.97■□□□□ 0.31
AP3S2P59780 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC16.97■□□□□ 0.31
AP3S2P59780 UNC93B8-201ENST00000511903 705 ntBASIC16.97■□□□□ 0.31
AP3S2P59780 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC16.97■□□□□ 0.31
AP3S2P59780 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC16.97■□□□□ 0.31
AP3S2P59780 RARRES2P11-201ENST00000635158 484 ntBASIC16.97■□□□□ 0.31
AP3S2P59780 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
AP3S2P59780 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.97■□□□□ 0.31
AP3S2P59780 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP3S2P59780 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP3S2P59780 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.97■□□□□ 0.31
AP3S2P59780 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP3S2P59780 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP3S2P59780 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
AP3S2P59780 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP3S2P59780 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP3S2P59780 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
AP3S2P59780 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
AP3S2P59780 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP3S2P59780 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP3S2P59780 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP3S2P59780 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP3S2P59780 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
AP3S2P59780 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.96■□□□□ 0.31
AP3S2P59780 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
AP3S2P59780 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC16.96■□□□□ 0.31
AP3S2P59780 AC133561.4-201ENST00000566112 224 ntBASIC16.96■□□□□ 0.31
AP3S2P59780 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
AP3S2P59780 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC16.96■□□□□ 0.31
AP3S2P59780 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC16.96■□□□□ 0.31
AP3S2P59780 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
AP3S2P59780 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP3S2P59780 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
AP3S2P59780 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
AP3S2P59780 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
AP3S2P59780 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
AP3S2P59780 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
AP3S2P59780 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP3S2P59780 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP3S2P59780 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
AP3S2P59780 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.96■□□□□ 0.31
AP3S2P59780 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP3S2P59780 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
AP3S2P59780 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
AP3S2P59780 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
AP3S2P59780 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
AP3S2P59780 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP3S2P59780 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.95■□□□□ 0.3
AP3S2P59780 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
AP3S2P59780 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.95■□□□□ 0.3
AP3S2P59780 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
AP3S2P59780 AL390961.4-201ENST00000623958 2535 ntBASIC16.95■□□□□ 0.3
AP3S2P59780 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.95■□□□□ 0.3
AP3S2P59780 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP3S2P59780 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
AP3S2P59780 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
AP3S2P59780 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC16.95■□□□□ 0.3
AP3S2P59780 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
AP3S2P59780 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP3S2P59780 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.95■□□□□ 0.3
AP3S2P59780 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC16.95■□□□□ 0.3
AP3S2P59780 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC16.95■□□□□ 0.3
AP3S2P59780 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
AP3S2P59780 CROCCP3-202ENST00000420820 1947 ntBASIC16.95■□□□□ 0.3
AP3S2P59780 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP3S2P59780 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP3S2P59780 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP3S2P59780 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.95■□□□□ 0.3
AP3S2P59780 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP3S2P59780 MFF-207ENST00000409565 1548 ntTSL 2 BASIC16.95■□□□□ 0.3
AP3S2P59780 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
AP3S2P59780 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP3S2P59780 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
AP3S2P59780 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
AP3S2P59780 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP3S2P59780 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP3S2P59780 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP3S2P59780 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
AP3S2P59780 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP3S2P59780 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP3S2P59780 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
AP3S2P59780 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP3S2P59780 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP3S2P59780 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
AP3S2P59780 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
AP3S2P59780 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
AP3S2P59780 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
AP3S2P59780 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
AP3S2P59780 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC16.94■□□□□ 0.3
AP3S2P59780 KRT16P3-201ENST00000439127 1283 ntBASIC16.94■□□□□ 0.3
AP3S2P59780 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.94■□□□□ 0.3
AP3S2P59780 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC16.94■□□□□ 0.3
AP3S2P59780 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
AP3S2P59780 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
AP3S2P59780 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
AP3S2P59780 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
AP3S2P59780 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
AP3S2P59780 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
AP3S2P59780 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms