Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
PER3P56645 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PER3P56645 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PER3P56645 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PER3P56645 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.24■□□□□ 0.51
PER3P56645 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PER3P56645 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
PER3P56645 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.24■□□□□ 0.51
PER3P56645 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.24■□□□□ 0.51
PER3P56645 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PER3P56645 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PER3P56645 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PER3P56645 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PER3P56645 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PER3P56645 KRASP1-201ENST00000407852 552 ntBASIC18.24■□□□□ 0.51
PER3P56645 AL390719.1-204ENST00000412397 1219 ntBASIC18.24■□□□□ 0.51
PER3P56645 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PER3P56645 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.24■□□□□ 0.51
PER3P56645 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
PER3P56645 PRKY-204ENST00000533551 1019 ntBASIC18.24■□□□□ 0.51
PER3P56645 C2orf69P4-201ENST00000565394 541 ntBASIC18.24■□□□□ 0.51
PER3P56645 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PER3P56645 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PER3P56645 AC097493.4-201ENST00000641197 219 ntBASIC18.24■□□□□ 0.51
PER3P56645 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PER3P56645 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PER3P56645 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PER3P56645 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PER3P56645 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PER3P56645 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.24■□□□□ 0.51
PER3P56645 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PER3P56645 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PER3P56645 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PER3P56645 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.23■□□□□ 0.51
PER3P56645 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
PER3P56645 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PER3P56645 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.23■□□□□ 0.51
PER3P56645 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.23■□□□□ 0.51
PER3P56645 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.23■□□□□ 0.51
PER3P56645 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PER3P56645 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.23■□□□□ 0.51
PER3P56645 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PER3P56645 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.23■□□□□ 0.51
PER3P56645 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PER3P56645 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
PER3P56645 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
PER3P56645 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PER3P56645 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
PER3P56645 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.23■□□□□ 0.51
PER3P56645 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PER3P56645 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.23■□□□□ 0.51
PER3P56645 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.23■□□□□ 0.51
PER3P56645 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.23■□□□□ 0.51
PER3P56645 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.23■□□□□ 0.51
PER3P56645 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PER3P56645 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PER3P56645 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PER3P56645 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PER3P56645 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PER3P56645 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PER3P56645 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PER3P56645 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PER3P56645 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PER3P56645 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
PER3P56645 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PER3P56645 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PER3P56645 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.22■□□□□ 0.51
PER3P56645 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
PER3P56645 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
PER3P56645 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PER3P56645 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.22■□□□□ 0.51
PER3P56645 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PER3P56645 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PER3P56645 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.22■□□□□ 0.51
PER3P56645 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.22■□□□□ 0.51
PER3P56645 AC113410.3-201ENST00000623366 203 ntBASIC18.22■□□□□ 0.51
PER3P56645 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
PER3P56645 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PER3P56645 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PER3P56645 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PER3P56645 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
PER3P56645 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PER3P56645 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PER3P56645 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PER3P56645 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PER3P56645 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PER3P56645 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PER3P56645 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PER3P56645 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.21■□□□□ 0.51
PER3P56645 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PER3P56645 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PER3P56645 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PER3P56645 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PER3P56645 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
PER3P56645 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PER3P56645 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.21■□□□□ 0.51
PER3P56645 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PER3P56645 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.21■□□□□ 0.51
PER3P56645 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.21■□□□□ 0.51
PER3P56645 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms