Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDH13P55290 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDH13P55290 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDH13P55290 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDH13P55290 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
CDH13P55290 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDH13P55290 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDH13P55290 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDH13P55290 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CDH13P55290 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.3■□□□□ 0.68
CDH13P55290 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.3■□□□□ 0.68
CDH13P55290 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.3■□□□□ 0.68
CDH13P55290 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CDH13P55290 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.3■□□□□ 0.68
CDH13P55290 AC005181.1-201ENST00000604782 1256 ntBASIC19.3■□□□□ 0.68
CDH13P55290 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.3■□□□□ 0.68
CDH13P55290 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDH13P55290 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CDH13P55290 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDH13P55290 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDH13P55290 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.3■□□□□ 0.68
CDH13P55290 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDH13P55290 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH13P55290 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CDH13P55290 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.29■□□□□ 0.68
CDH13P55290 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.29■□□□□ 0.68
CDH13P55290 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH13P55290 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH13P55290 AP001271.2-201ENST00000624018 1556 ntBASIC19.29■□□□□ 0.68
CDH13P55290 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH13P55290 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH13P55290 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDH13P55290 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH13P55290 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDH13P55290 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDH13P55290 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
CDH13P55290 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.29■□□□□ 0.68
CDH13P55290 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDH13P55290 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.29■□□□□ 0.68
CDH13P55290 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
CDH13P55290 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.29■□□□□ 0.68
CDH13P55290 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH13P55290 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH13P55290 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDH13P55290 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH13P55290 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
CDH13P55290 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.28■□□□□ 0.68
CDH13P55290 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH13P55290 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH13P55290 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.28■□□□□ 0.68
CDH13P55290 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CDH13P55290 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH13P55290 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.28■□□□□ 0.68
CDH13P55290 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH13P55290 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH13P55290 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.28■□□□□ 0.68
CDH13P55290 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDH13P55290 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH13P55290 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDH13P55290 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.28■□□□□ 0.68
CDH13P55290 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.28■□□□□ 0.68
CDH13P55290 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.28■□□□□ 0.68
CDH13P55290 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CDH13P55290 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDH13P55290 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH13P55290 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDH13P55290 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH13P55290 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.28■□□□□ 0.68
CDH13P55290 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDH13P55290 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH13P55290 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.28■□□□□ 0.68
CDH13P55290 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH13P55290 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH13P55290 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.27■□□□□ 0.68
CDH13P55290 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH13P55290 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH13P55290 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH13P55290 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH13P55290 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.27■□□□□ 0.68
CDH13P55290 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH13P55290 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH13P55290 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH13P55290 AL020996.1-203ENST00000536896 2307 ntBASIC19.27■□□□□ 0.68
CDH13P55290 PHGDH-210ENST00000641115 1638 ntBASIC19.27■□□□□ 0.68
CDH13P55290 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH13P55290 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.27■□□□□ 0.68
CDH13P55290 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CDH13P55290 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.27■□□□□ 0.68
CDH13P55290 AL512625.2-201ENST00000417533 625 ntBASIC19.27■□□□□ 0.68
CDH13P55290 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH13P55290 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.27■□□□□ 0.68
CDH13P55290 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH13P55290 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
CDH13P55290 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.27■□□□□ 0.68
CDH13P55290 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.27■□□□□ 0.68
CDH13P55290 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.27■□□□□ 0.68
CDH13P55290 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH13P55290 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CDH13P55290 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.27■□□□□ 0.68
CDH13P55290 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms