Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.69■■□□□ 1.06
NCKAP1LP55160 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.69■■□□□ 1.06
NCKAP1LP55160 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.69■■□□□ 1.06
NCKAP1LP55160 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.69■■□□□ 1.06
NCKAP1LP55160 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NCKAP1LP55160 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.69■■□□□ 1.06
NCKAP1LP55160 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NCKAP1LP55160 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NCKAP1LP55160 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NCKAP1LP55160 AC239809.2-201ENST00000415381 517 ntBASIC21.68■■□□□ 1.06
NCKAP1LP55160 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
NCKAP1LP55160 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NCKAP1LP55160 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.68■■□□□ 1.06
NCKAP1LP55160 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.68■■□□□ 1.06
NCKAP1LP55160 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NCKAP1LP55160 AL359736.2-201ENST00000621992 437 ntBASIC21.68■■□□□ 1.06
NCKAP1LP55160 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.68■■□□□ 1.06
NCKAP1LP55160 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.68■■□□□ 1.06
NCKAP1LP55160 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NCKAP1LP55160 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.68■■□□□ 1.06
NCKAP1LP55160 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NCKAP1LP55160 AP006587.1-201ENST00000534129 1502 ntBASIC21.68■■□□□ 1.06
NCKAP1LP55160 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NCKAP1LP55160 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.68■■□□□ 1.06
NCKAP1LP55160 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NCKAP1LP55160 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NCKAP1LP55160 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NCKAP1LP55160 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NCKAP1LP55160 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NCKAP1LP55160 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NCKAP1LP55160 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NCKAP1LP55160 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
NCKAP1LP55160 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
NCKAP1LP55160 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.67■■□□□ 1.06
NCKAP1LP55160 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NCKAP1LP55160 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
NCKAP1LP55160 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NCKAP1LP55160 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.67■■□□□ 1.06
NCKAP1LP55160 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
NCKAP1LP55160 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NCKAP1LP55160 KRASP1-201ENST00000407852 552 ntBASIC21.67■■□□□ 1.06
NCKAP1LP55160 GCSHP5-201ENST00000443090 522 ntBASIC21.67■■□□□ 1.06
NCKAP1LP55160 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.67■■□□□ 1.06
NCKAP1LP55160 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
NCKAP1LP55160 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.67■■□□□ 1.06
NCKAP1LP55160 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.67■■□□□ 1.06
NCKAP1LP55160 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
NCKAP1LP55160 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.67■■□□□ 1.06
NCKAP1LP55160 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NCKAP1LP55160 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
NCKAP1LP55160 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.67■■□□□ 1.06
NCKAP1LP55160 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.66■■□□□ 1.06
NCKAP1LP55160 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
NCKAP1LP55160 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.66■■□□□ 1.06
NCKAP1LP55160 NBPF21P-201ENST00000425093 1451 ntBASIC21.66■■□□□ 1.06
NCKAP1LP55160 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NCKAP1LP55160 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NCKAP1LP55160 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NCKAP1LP55160 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NCKAP1LP55160 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.66■■□□□ 1.06
NCKAP1LP55160 YBX1P10-201ENST00000444752 975 ntBASIC21.66■■□□□ 1.06
NCKAP1LP55160 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.66■■□□□ 1.06
NCKAP1LP55160 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.66■■□□□ 1.06
NCKAP1LP55160 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.66■■□□□ 1.06
NCKAP1LP55160 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
NCKAP1LP55160 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
NCKAP1LP55160 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NCKAP1LP55160 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.66■■□□□ 1.06
NCKAP1LP55160 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NCKAP1LP55160 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NCKAP1LP55160 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
NCKAP1LP55160 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.65■■□□□ 1.06
NCKAP1LP55160 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NCKAP1LP55160 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NCKAP1LP55160 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NCKAP1LP55160 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
NCKAP1LP55160 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NCKAP1LP55160 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.65■■□□□ 1.06
NCKAP1LP55160 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NCKAP1LP55160 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.65■■□□□ 1.06
NCKAP1LP55160 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
NCKAP1LP55160 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.65■■□□□ 1.06
NCKAP1LP55160 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.65■■□□□ 1.06
NCKAP1LP55160 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
NCKAP1LP55160 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.64■■□□□ 1.06
NCKAP1LP55160 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
NCKAP1LP55160 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
NCKAP1LP55160 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.64■■□□□ 1.05
NCKAP1LP55160 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.64■■□□□ 1.05
NCKAP1LP55160 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.64■■□□□ 1.05
NCKAP1LP55160 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.64■■□□□ 1.05
NCKAP1LP55160 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.64■■□□□ 1.05
NCKAP1LP55160 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NCKAP1LP55160 AC142381.4-202ENST00000563973 229 ntBASIC21.64■■□□□ 1.05
NCKAP1LP55160 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
NCKAP1LP55160 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.64■■□□□ 1.05
NCKAP1LP55160 AC110285.5-201ENST00000611501 352 ntBASIC21.64■■□□□ 1.05
NCKAP1LP55160 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.64■■□□□ 1.05
NCKAP1LP55160 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.64■■□□□ 1.05
NCKAP1LP55160 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms