Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDX1P52945 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDX1P52945 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PDX1P52945 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDX1P52945 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
PDX1P52945 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDX1P52945 MMP23A-201ENST00000234610 1017 ntBASIC19.2■□□□□ 0.66
PDX1P52945 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDX1P52945 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDX1P52945 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PDX1P52945 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
PDX1P52945 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
PDX1P52945 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.2■□□□□ 0.66
PDX1P52945 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.2■□□□□ 0.66
PDX1P52945 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.2■□□□□ 0.66
PDX1P52945 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDX1P52945 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PDX1P52945 PTBP1P-201ENST00000554374 1601 ntBASIC19.2■□□□□ 0.66
PDX1P52945 FEM1AP1-201ENST00000431297 1995 ntBASIC19.2■□□□□ 0.66
PDX1P52945 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.2■□□□□ 0.66
PDX1P52945 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDX1P52945 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDX1P52945 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PDX1P52945 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDX1P52945 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PDX1P52945 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
PDX1P52945 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDX1P52945 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDX1P52945 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.2■□□□□ 0.66
PDX1P52945 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDX1P52945 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDX1P52945 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDX1P52945 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.19■□□□□ 0.66
PDX1P52945 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDX1P52945 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
PDX1P52945 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDX1P52945 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDX1P52945 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
PDX1P52945 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDX1P52945 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDX1P52945 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PDX1P52945 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.19■□□□□ 0.66
PDX1P52945 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.19■□□□□ 0.66
PDX1P52945 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.19■□□□□ 0.66
PDX1P52945 RN7SL850P-201ENST00000579959 291 ntBASIC19.19■□□□□ 0.66
PDX1P52945 AC073195.1-201ENST00000607241 877 ntBASIC19.19■□□□□ 0.66
PDX1P52945 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.19■□□□□ 0.66
PDX1P52945 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.19■□□□□ 0.66
PDX1P52945 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDX1P52945 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDX1P52945 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDX1P52945 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDX1P52945 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PDX1P52945 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDX1P52945 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
PDX1P52945 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDX1P52945 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDX1P52945 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PDX1P52945 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PDX1P52945 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PDX1P52945 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PDX1P52945 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDX1P52945 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDX1P52945 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDX1P52945 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.18■□□□□ 0.66
PDX1P52945 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PDX1P52945 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDX1P52945 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDX1P52945 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
PDX1P52945 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.18■□□□□ 0.66
PDX1P52945 RBM17P1-201ENST00000453646 1190 ntBASIC19.18■□□□□ 0.66
PDX1P52945 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.18■□□□□ 0.66
PDX1P52945 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PDX1P52945 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDX1P52945 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDX1P52945 LINC01006-201ENST00000333319 2292 ntBASIC19.18■□□□□ 0.66
PDX1P52945 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDX1P52945 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
PDX1P52945 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PDX1P52945 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PDX1P52945 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PDX1P52945 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDX1P52945 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDX1P52945 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDX1P52945 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
PDX1P52945 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PDX1P52945 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.17■□□□□ 0.66
PDX1P52945 TMPOP1-202ENST00000424642 1267 ntBASIC19.17■□□□□ 0.66
PDX1P52945 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDX1P52945 NUDT16P1-203ENST00000513809 620 ntBASIC19.17■□□□□ 0.66
PDX1P52945 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.17■□□□□ 0.66
PDX1P52945 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.17■□□□□ 0.66
PDX1P52945 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.17■□□□□ 0.66
PDX1P52945 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.17■□□□□ 0.66
PDX1P52945 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.17■□□□□ 0.66
PDX1P52945 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
PDX1P52945 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.17■□□□□ 0.66
PDX1P52945 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDX1P52945 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PDX1P52945 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms