Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CDR1P51861 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDR1P51861 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDR1P51861 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.54■■□□□ 1.04
CDR1P51861 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDR1P51861 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.54■■□□□ 1.04
CDR1P51861 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.54■■□□□ 1.04
CDR1P51861 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CDR1P51861 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.54■■□□□ 1.04
CDR1P51861 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.54■■□□□ 1.04
CDR1P51861 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.54■■□□□ 1.04
CDR1P51861 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.54■■□□□ 1.04
CDR1P51861 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDR1P51861 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.54■■□□□ 1.04
CDR1P51861 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDR1P51861 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDR1P51861 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC21.54■■□□□ 1.04
CDR1P51861 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDR1P51861 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDR1P51861 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CDR1P51861 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDR1P51861 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
CDR1P51861 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDR1P51861 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.53■■□□□ 1.04
CDR1P51861 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDR1P51861 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.53■■□□□ 1.04
CDR1P51861 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
CDR1P51861 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDR1P51861 UNC93B4-201ENST00000505679 747 ntBASIC21.53■■□□□ 1.04
CDR1P51861 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CDR1P51861 MIR2861-201ENST00000636310 90 ntBASIC21.53■■□□□ 1.04
CDR1P51861 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDR1P51861 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDR1P51861 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDR1P51861 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.53■■□□□ 1.04
CDR1P51861 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDR1P51861 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDR1P51861 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.52■■□□□ 1.04
CDR1P51861 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDR1P51861 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CDR1P51861 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDR1P51861 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.52■■□□□ 1.04
CDR1P51861 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDR1P51861 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
CDR1P51861 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
CDR1P51861 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.52■■□□□ 1.04
CDR1P51861 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
CDR1P51861 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CDR1P51861 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDR1P51861 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDR1P51861 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDR1P51861 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.52■■□□□ 1.04
CDR1P51861 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDR1P51861 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.52■■□□□ 1.04
CDR1P51861 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.52■■□□□ 1.04
CDR1P51861 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDR1P51861 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
CDR1P51861 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDR1P51861 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDR1P51861 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDR1P51861 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CDR1P51861 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CDR1P51861 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
CDR1P51861 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDR1P51861 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDR1P51861 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.51■■□□□ 1.03
CDR1P51861 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDR1P51861 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.51■■□□□ 1.03
CDR1P51861 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.51■■□□□ 1.03
CDR1P51861 AC093827.2-201ENST00000512654 315 ntBASIC21.51■■□□□ 1.03
CDR1P51861 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.51■■□□□ 1.03
CDR1P51861 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.51■■□□□ 1.03
CDR1P51861 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.51■■□□□ 1.03
CDR1P51861 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.51■■□□□ 1.03
CDR1P51861 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDR1P51861 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDR1P51861 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDR1P51861 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDR1P51861 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
CDR1P51861 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
CDR1P51861 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDR1P51861 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.5■■□□□ 1.03
CDR1P51861 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDR1P51861 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDR1P51861 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDR1P51861 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDR1P51861 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CDR1P51861 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
CDR1P51861 AC142381.4-202ENST00000563973 229 ntBASIC21.5■■□□□ 1.03
CDR1P51861 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.5■■□□□ 1.03
CDR1P51861 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.5■■□□□ 1.03
CDR1P51861 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDR1P51861 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDR1P51861 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDR1P51861 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
CDR1P51861 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDR1P51861 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDR1P51861 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CDR1P51861 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.49■■□□□ 1.03
CDR1P51861 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms