Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF144AP50876 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF144AP50876 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF144AP50876 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF144AP50876 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF144AP50876 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF144AP50876 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.33■□□□□ 0.53
RNF144AP50876 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF144AP50876 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF144AP50876 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF144AP50876 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF144AP50876 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
RNF144AP50876 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.33■□□□□ 0.52
RNF144AP50876 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RNF144AP50876 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.33■□□□□ 0.52
RNF144AP50876 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.33■□□□□ 0.52
RNF144AP50876 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RNF144AP50876 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF144AP50876 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.33■□□□□ 0.52
RNF144AP50876 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
RNF144AP50876 AC124283.5-201ENST00000624661 1809 ntBASIC18.33■□□□□ 0.52
RNF144AP50876 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF144AP50876 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF144AP50876 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF144AP50876 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RNF144AP50876 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF144AP50876 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF144AP50876 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF144AP50876 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF144AP50876 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF144AP50876 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
RNF144AP50876 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF144AP50876 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.32■□□□□ 0.52
RNF144AP50876 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.32■□□□□ 0.52
RNF144AP50876 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF144AP50876 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.32■□□□□ 0.52
RNF144AP50876 MIR4758-201ENST00000577688 71 ntBASIC18.32■□□□□ 0.52
RNF144AP50876 AC083880.1-201ENST00000608266 535 ntBASIC18.32■□□□□ 0.52
RNF144AP50876 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF144AP50876 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF144AP50876 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF144AP50876 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF144AP50876 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF144AP50876 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF144AP50876 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF144AP50876 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.32■□□□□ 0.52
RNF144AP50876 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF144AP50876 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF144AP50876 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF144AP50876 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF144AP50876 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF144AP50876 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RNF144AP50876 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF144AP50876 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF144AP50876 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
RNF144AP50876 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF144AP50876 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF144AP50876 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.31■□□□□ 0.52
RNF144AP50876 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF144AP50876 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF144AP50876 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.31■□□□□ 0.52
RNF144AP50876 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF144AP50876 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF144AP50876 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF144AP50876 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF144AP50876 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF144AP50876 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF144AP50876 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.31■□□□□ 0.52
RNF144AP50876 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.31■□□□□ 0.52
RNF144AP50876 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
RNF144AP50876 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF144AP50876 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
RNF144AP50876 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF144AP50876 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RNF144AP50876 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
RNF144AP50876 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF144AP50876 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF144AP50876 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF144AP50876 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
RNF144AP50876 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RNF144AP50876 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RNF144AP50876 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF144AP50876 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RNF144AP50876 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RNF144AP50876 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF144AP50876 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF144AP50876 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF144AP50876 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.3■□□□□ 0.52
RNF144AP50876 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RNF144AP50876 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.3■□□□□ 0.52
RNF144AP50876 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF144AP50876 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
RNF144AP50876 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF144AP50876 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF144AP50876 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF144AP50876 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF144AP50876 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RNF144AP50876 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.3■□□□□ 0.52
RNF144AP50876 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RNF144AP50876 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms