Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC12.52□□□□□ -0.41
UBE2AP49459 KRT18P61-201ENST00000585825 1298 ntBASIC12.52□□□□□ -0.41
UBE2AP49459 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UBE2AP49459 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
UBE2AP49459 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UBE2AP49459 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
UBE2AP49459 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC12.52□□□□□ -0.41
UBE2AP49459 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC12.52□□□□□ -0.41
UBE2AP49459 KRT8P36-201ENST00000489121 1440 ntBASIC12.52□□□□□ -0.41
UBE2AP49459 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC12.52□□□□□ -0.41
UBE2AP49459 AL512408.1-201ENST00000569378 2000 ntBASIC12.52□□□□□ -0.41
UBE2AP49459 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
UBE2AP49459 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
UBE2AP49459 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
UBE2AP49459 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC12.51□□□□□ -0.41
UBE2AP49459 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
UBE2AP49459 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC12.51□□□□□ -0.41
UBE2AP49459 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UBE2AP49459 DPP3P2-201ENST00000416030 1696 ntBASIC12.51□□□□□ -0.41
UBE2AP49459 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC12.51□□□□□ -0.41
UBE2AP49459 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
UBE2AP49459 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UBE2AP49459 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
UBE2AP49459 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC12.51□□□□□ -0.41
UBE2AP49459 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC12.51□□□□□ -0.41
UBE2AP49459 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
UBE2AP49459 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC12.51□□□□□ -0.41
UBE2AP49459 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
UBE2AP49459 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC12.51□□□□□ -0.41
UBE2AP49459 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC12.51□□□□□ -0.41
UBE2AP49459 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC12.51□□□□□ -0.41
UBE2AP49459 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
UBE2AP49459 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
UBE2AP49459 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
UBE2AP49459 AC069236.1-201ENST00000604339 616 ntBASIC12.51□□□□□ -0.41
UBE2AP49459 AL356652.1-201ENST00000615962 565 ntBASIC12.51□□□□□ -0.41
UBE2AP49459 BID-214ENST00000617586 542 ntTSL 5 BASIC12.51□□□□□ -0.41
UBE2AP49459 ANKRD20A6P-201ENST00000618763 204 ntBASIC12.51□□□□□ -0.41
UBE2AP49459 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC12.51□□□□□ -0.41
UBE2AP49459 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
UBE2AP49459 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UBE2AP49459 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UBE2AP49459 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UBE2AP49459 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC12.51□□□□□ -0.41
UBE2AP49459 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UBE2AP49459 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UBE2AP49459 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
UBE2AP49459 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
UBE2AP49459 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC12.51□□□□□ -0.41
UBE2AP49459 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC12.51□□□□□ -0.41
UBE2AP49459 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC12.51□□□□□ -0.41
UBE2AP49459 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
UBE2AP49459 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2AP49459 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC12.5□□□□□ -0.41
UBE2AP49459 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2AP49459 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC12.5□□□□□ -0.41
UBE2AP49459 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2AP49459 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2AP49459 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
UBE2AP49459 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC12.5□□□□□ -0.41
UBE2AP49459 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC12.5□□□□□ -0.41
UBE2AP49459 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC12.5□□□□□ -0.41
UBE2AP49459 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2AP49459 SMG8-203ENST00000578922 2178 ntBASIC12.5□□□□□ -0.41
UBE2AP49459 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2AP49459 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
UBE2AP49459 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2AP49459 OR6D1P-203ENST00000641209 4860 ntBASIC12.5□□□□□ -0.41
UBE2AP49459 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2AP49459 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2AP49459 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC12.5□□□□□ -0.41
UBE2AP49459 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2AP49459 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2AP49459 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC12.5□□□□□ -0.41
UBE2AP49459 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2AP49459 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC12.5□□□□□ -0.41
UBE2AP49459 VMO1-204ENST00000441199 741 ntTSL 2 BASIC12.5□□□□□ -0.41
UBE2AP49459 AC007322.4-201ENST00000509611 723 ntBASIC12.5□□□□□ -0.41
UBE2AP49459 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC12.5□□□□□ -0.41
UBE2AP49459 AL162412.1-201ENST00000567129 965 ntBASIC12.5□□□□□ -0.41
UBE2AP49459 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC12.5□□□□□ -0.41
UBE2AP49459 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2AP49459 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC12.5□□□□□ -0.41
UBE2AP49459 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2AP49459 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
UBE2AP49459 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC12.5□□□□□ -0.41
UBE2AP49459 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
UBE2AP49459 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2AP49459 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2AP49459 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2AP49459 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2AP49459 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2AP49459 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC12.5□□□□□ -0.41
UBE2AP49459 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBE2AP49459 FLJ16779-201ENST00000612722 7638 ntBASIC12.49□□□□□ -0.41
UBE2AP49459 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBE2AP49459 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBE2AP49459 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
UBE2AP49459 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBE2AP49459 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms