Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.53■□□□□ 0.56
RFX3P48380 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RFX3P48380 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RFX3P48380 AC091874.3-201ENST00000512672 1195 ntBASIC18.53■□□□□ 0.56
RFX3P48380 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
RFX3P48380 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
RFX3P48380 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.53■□□□□ 0.56
RFX3P48380 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.53■□□□□ 0.56
RFX3P48380 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RFX3P48380 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFX3P48380 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFX3P48380 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFX3P48380 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
RFX3P48380 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
RFX3P48380 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFX3P48380 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
RFX3P48380 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFX3P48380 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.53■□□□□ 0.56
RFX3P48380 PTBP1P-201ENST00000554374 1601 ntBASIC18.52■□□□□ 0.56
RFX3P48380 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
RFX3P48380 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFX3P48380 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFX3P48380 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
RFX3P48380 KRT8P17-201ENST00000453110 1448 ntBASIC18.52■□□□□ 0.56
RFX3P48380 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFX3P48380 ID1-201ENST00000376105 1233 ntBASIC18.52■□□□□ 0.56
RFX3P48380 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RFX3P48380 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFX3P48380 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
RFX3P48380 AC097658.1-201ENST00000475555 843 ntBASIC18.52■□□□□ 0.56
RFX3P48380 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFX3P48380 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.52■□□□□ 0.56
RFX3P48380 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.52■□□□□ 0.56
RFX3P48380 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
RFX3P48380 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.52■□□□□ 0.56
RFX3P48380 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.52■□□□□ 0.56
RFX3P48380 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFX3P48380 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RFX3P48380 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RFX3P48380 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
RFX3P48380 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.55
RFX3P48380 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RFX3P48380 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.55
RFX3P48380 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RFX3P48380 BX119927.1-201ENST00000636596 1552 ntBASIC18.51■□□□□ 0.55
RFX3P48380 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
RFX3P48380 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFX3P48380 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RFX3P48380 KRT8P20-201ENST00000423953 1409 ntBASIC18.51■□□□□ 0.55
RFX3P48380 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RFX3P48380 AL691432.2-201ENST00000607222 2038 ntBASIC18.51■□□□□ 0.55
RFX3P48380 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFX3P48380 HLA-G-202ENST00000376815 851 ntBASIC18.51■□□□□ 0.55
RFX3P48380 HLA-G-203ENST00000376818 1127 ntBASIC18.51■□□□□ 0.55
RFX3P48380 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFX3P48380 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.51■□□□□ 0.55
RFX3P48380 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RFX3P48380 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.51■□□□□ 0.55
RFX3P48380 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.51■□□□□ 0.55
RFX3P48380 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.51■□□□□ 0.55
RFX3P48380 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.51■□□□□ 0.55
RFX3P48380 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.51■□□□□ 0.55
RFX3P48380 AL031963.3-201ENST00000606441 850 ntBASIC18.51■□□□□ 0.55
RFX3P48380 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.51■□□□□ 0.55
RFX3P48380 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RFX3P48380 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.51■□□□□ 0.55
RFX3P48380 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFX3P48380 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFX3P48380 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFX3P48380 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFX3P48380 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFX3P48380 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.5■□□□□ 0.55
RFX3P48380 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RFX3P48380 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
RFX3P48380 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.5■□□□□ 0.55
RFX3P48380 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFX3P48380 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
RFX3P48380 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
RFX3P48380 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.5■□□□□ 0.55
RFX3P48380 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RFX3P48380 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.5■□□□□ 0.55
RFX3P48380 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFX3P48380 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RFX3P48380 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RFX3P48380 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.5■□□□□ 0.55
RFX3P48380 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFX3P48380 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RFX3P48380 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFX3P48380 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.5■□□□□ 0.55
RFX3P48380 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.5■□□□□ 0.55
RFX3P48380 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.5■□□□□ 0.55
RFX3P48380 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.5■□□□□ 0.55
RFX3P48380 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RFX3P48380 TCF3P1-201ENST00000423021 1937 ntBASIC18.5■□□□□ 0.55
RFX3P48380 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.5■□□□□ 0.55
RFX3P48380 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFX3P48380 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFX3P48380 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.5■□□□□ 0.55
RFX3P48380 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.5■□□□□ 0.55
RFX3P48380 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms