Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.21■□□□□ 0.67
EPHA3P29320 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EPHA3P29320 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
EPHA3P29320 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EPHA3P29320 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
EPHA3P29320 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EPHA3P29320 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
EPHA3P29320 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
EPHA3P29320 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
EPHA3P29320 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
EPHA3P29320 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EPHA3P29320 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.21■□□□□ 0.67
EPHA3P29320 AL591742.1-201ENST00000604433 565 ntBASIC19.21■□□□□ 0.67
EPHA3P29320 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EPHA3P29320 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
EPHA3P29320 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EPHA3P29320 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EPHA3P29320 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.21■□□□□ 0.67
EPHA3P29320 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.21■□□□□ 0.67
EPHA3P29320 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.2■□□□□ 0.66
EPHA3P29320 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.2■□□□□ 0.66
EPHA3P29320 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EPHA3P29320 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.2■□□□□ 0.66
EPHA3P29320 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.2■□□□□ 0.66
EPHA3P29320 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
EPHA3P29320 KRT16P6-202ENST00000425692 1426 ntBASIC19.2■□□□□ 0.66
EPHA3P29320 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EPHA3P29320 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EPHA3P29320 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EPHA3P29320 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.2■□□□□ 0.66
EPHA3P29320 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.2■□□□□ 0.66
EPHA3P29320 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EPHA3P29320 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.2■□□□□ 0.66
EPHA3P29320 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EPHA3P29320 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
EPHA3P29320 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
EPHA3P29320 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EPHA3P29320 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
EPHA3P29320 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
EPHA3P29320 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.19■□□□□ 0.66
EPHA3P29320 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EPHA3P29320 AC026471.1-201ENST00000564629 3026 ntBASIC19.19■□□□□ 0.66
EPHA3P29320 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EPHA3P29320 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EPHA3P29320 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
EPHA3P29320 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EPHA3P29320 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
EPHA3P29320 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.19■□□□□ 0.66
EPHA3P29320 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
EPHA3P29320 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.19■□□□□ 0.66
EPHA3P29320 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.19■□□□□ 0.66
EPHA3P29320 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EPHA3P29320 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.19■□□□□ 0.66
EPHA3P29320 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
EPHA3P29320 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
EPHA3P29320 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
EPHA3P29320 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EPHA3P29320 LINC01465-201ENST00000408887 1940 ntBASIC19.19■□□□□ 0.66
EPHA3P29320 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
EPHA3P29320 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
EPHA3P29320 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EPHA3P29320 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
EPHA3P29320 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
EPHA3P29320 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.19■□□□□ 0.66
EPHA3P29320 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.18■□□□□ 0.66
EPHA3P29320 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EPHA3P29320 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
EPHA3P29320 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EPHA3P29320 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EPHA3P29320 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
EPHA3P29320 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
EPHA3P29320 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
EPHA3P29320 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EPHA3P29320 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
EPHA3P29320 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.18■□□□□ 0.66
EPHA3P29320 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.18■□□□□ 0.66
EPHA3P29320 TERF1P5-201ENST00000477545 1207 ntBASIC19.18■□□□□ 0.66
EPHA3P29320 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EPHA3P29320 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
EPHA3P29320 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
EPHA3P29320 AC016405.3-201ENST00000607710 860 ntBASIC19.18■□□□□ 0.66
EPHA3P29320 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
EPHA3P29320 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
EPHA3P29320 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EPHA3P29320 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
EPHA3P29320 AP001271.2-201ENST00000624018 1556 ntBASIC19.18■□□□□ 0.66
EPHA3P29320 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EPHA3P29320 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EPHA3P29320 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EPHA3P29320 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EPHA3P29320 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
EPHA3P29320 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EPHA3P29320 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EPHA3P29320 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
EPHA3P29320 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EPHA3P29320 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
EPHA3P29320 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
EPHA3P29320 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
EPHA3P29320 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
EPHA3P29320 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms