Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PRKCAP17252 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRKCAP17252 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRKCAP17252 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
PRKCAP17252 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRKCAP17252 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRKCAP17252 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PRKCAP17252 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRKCAP17252 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.25■□□□□ 0.51
PRKCAP17252 AC097658.1-201ENST00000475555 843 ntBASIC18.25■□□□□ 0.51
PRKCAP17252 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PRKCAP17252 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.25■□□□□ 0.51
PRKCAP17252 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PRKCAP17252 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.25■□□□□ 0.51
PRKCAP17252 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.25■□□□□ 0.51
PRKCAP17252 AC018445.3-201ENST00000624177 1945 ntBASIC18.25■□□□□ 0.51
PRKCAP17252 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
PRKCAP17252 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRKCAP17252 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRKCAP17252 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRKCAP17252 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRKCAP17252 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRKCAP17252 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRKCAP17252 PCDHAC2-203ENST00000615316 3011 ntBASIC18.24■□□□□ 0.51
PRKCAP17252 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.24■□□□□ 0.51
PRKCAP17252 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.24■□□□□ 0.51
PRKCAP17252 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRKCAP17252 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRKCAP17252 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.24■□□□□ 0.51
PRKCAP17252 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRKCAP17252 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.24■□□□□ 0.51
PRKCAP17252 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.24■□□□□ 0.51
PRKCAP17252 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.24■□□□□ 0.51
PRKCAP17252 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.24■□□□□ 0.51
PRKCAP17252 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRKCAP17252 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PRKCAP17252 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRKCAP17252 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PRKCAP17252 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRKCAP17252 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRKCAP17252 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PRKCAP17252 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRKCAP17252 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PRKCAP17252 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRKCAP17252 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRKCAP17252 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.23■□□□□ 0.51
PRKCAP17252 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRKCAP17252 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRKCAP17252 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PRKCAP17252 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.23■□□□□ 0.51
PRKCAP17252 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.23■□□□□ 0.51
PRKCAP17252 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.23■□□□□ 0.51
PRKCAP17252 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.23■□□□□ 0.51
PRKCAP17252 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
PRKCAP17252 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
PRKCAP17252 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PRKCAP17252 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.23■□□□□ 0.51
PRKCAP17252 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.23■□□□□ 0.51
PRKCAP17252 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRKCAP17252 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRKCAP17252 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.23■□□□□ 0.51
PRKCAP17252 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PRKCAP17252 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
PRKCAP17252 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRKCAP17252 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRKCAP17252 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.22■□□□□ 0.51
PRKCAP17252 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
PRKCAP17252 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PRKCAP17252 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.22■□□□□ 0.51
PRKCAP17252 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRKCAP17252 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.22■□□□□ 0.51
PRKCAP17252 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRKCAP17252 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PRKCAP17252 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PRKCAP17252 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.22■□□□□ 0.51
PRKCAP17252 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PRKCAP17252 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.22■□□□□ 0.51
PRKCAP17252 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.22■□□□□ 0.51
PRKCAP17252 AC083880.1-201ENST00000608266 535 ntBASIC18.22■□□□□ 0.51
PRKCAP17252 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRKCAP17252 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRKCAP17252 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRKCAP17252 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.22■□□□□ 0.51
PRKCAP17252 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PRKCAP17252 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRKCAP17252 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRKCAP17252 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRKCAP17252 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRKCAP17252 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRKCAP17252 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PRKCAP17252 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PRKCAP17252 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRKCAP17252 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
PRKCAP17252 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRKCAP17252 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRKCAP17252 AC023632.3-201ENST00000521633 145 ntBASIC18.21■□□□□ 0.51
PRKCAP17252 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRKCAP17252 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRKCAP17252 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRKCAP17252 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms