Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UBL4AP11441 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBL4AP11441 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBL4AP11441 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
UBL4AP11441 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UBL4AP11441 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBL4AP11441 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBL4AP11441 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBL4AP11441 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UBL4AP11441 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.25■□□□□ 0.51
UBL4AP11441 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBL4AP11441 AL355802.2-201ENST00000402069 882 ntBASIC18.25■□□□□ 0.51
UBL4AP11441 AL390719.1-204ENST00000412397 1219 ntBASIC18.25■□□□□ 0.51
UBL4AP11441 AC073210.2-201ENST00000430369 194 ntBASIC18.25■□□□□ 0.51
UBL4AP11441 AC069152.1-201ENST00000438030 544 ntBASIC18.25■□□□□ 0.51
UBL4AP11441 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.25■□□□□ 0.51
UBL4AP11441 AC142086.2-201ENST00000569753 217 ntBASIC18.25■□□□□ 0.51
UBL4AP11441 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBL4AP11441 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UBL4AP11441 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBL4AP11441 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.25■□□□□ 0.51
UBL4AP11441 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBL4AP11441 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBL4AP11441 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBL4AP11441 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBL4AP11441 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UBL4AP11441 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
UBL4AP11441 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBL4AP11441 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBL4AP11441 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.24■□□□□ 0.51
UBL4AP11441 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBL4AP11441 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBL4AP11441 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBL4AP11441 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UBL4AP11441 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBL4AP11441 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBL4AP11441 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.24■□□□□ 0.51
UBL4AP11441 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.24■□□□□ 0.51
UBL4AP11441 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBL4AP11441 AC087289.5-201ENST00000586076 3175 ntBASIC18.24■□□□□ 0.51
UBL4AP11441 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UBL4AP11441 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.24■□□□□ 0.51
UBL4AP11441 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.24■□□□□ 0.51
UBL4AP11441 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBL4AP11441 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UBL4AP11441 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.23■□□□□ 0.51
UBL4AP11441 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBL4AP11441 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBL4AP11441 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.23■□□□□ 0.51
UBL4AP11441 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBL4AP11441 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBL4AP11441 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBL4AP11441 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
UBL4AP11441 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
UBL4AP11441 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBL4AP11441 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBL4AP11441 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBL4AP11441 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
UBL4AP11441 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UBL4AP11441 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UBL4AP11441 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBL4AP11441 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBL4AP11441 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.23■□□□□ 0.51
UBL4AP11441 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
UBL4AP11441 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.23■□□□□ 0.51
UBL4AP11441 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBL4AP11441 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.23■□□□□ 0.51
UBL4AP11441 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.23■□□□□ 0.51
UBL4AP11441 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBL4AP11441 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBL4AP11441 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBL4AP11441 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.23■□□□□ 0.51
UBL4AP11441 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBL4AP11441 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBL4AP11441 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UBL4AP11441 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UBL4AP11441 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBL4AP11441 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBL4AP11441 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBL4AP11441 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.22■□□□□ 0.51
UBL4AP11441 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBL4AP11441 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.22■□□□□ 0.51
UBL4AP11441 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
UBL4AP11441 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBL4AP11441 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
UBL4AP11441 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UBL4AP11441 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBL4AP11441 ID1-201ENST00000376105 1233 ntBASIC18.22■□□□□ 0.51
UBL4AP11441 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.22■□□□□ 0.51
UBL4AP11441 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
UBL4AP11441 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UBL4AP11441 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.22■□□□□ 0.51
UBL4AP11441 AC005829.2-201ENST00000571422 1056 ntBASIC18.22■□□□□ 0.51
UBL4AP11441 AC083880.1-201ENST00000608266 535 ntBASIC18.22■□□□□ 0.51
UBL4AP11441 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBL4AP11441 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBL4AP11441 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.22■□□□□ 0.51
UBL4AP11441 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBL4AP11441 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.22■□□□□ 0.51
UBL4AP11441 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms