Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RARAP10276 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RARAP10276 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
RARAP10276 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RARAP10276 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RARAP10276 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.73■□□□□ 0.91
RARAP10276 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.73■□□□□ 0.91
RARAP10276 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RARAP10276 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.73■□□□□ 0.91
RARAP10276 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RARAP10276 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RARAP10276 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RARAP10276 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RARAP10276 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RARAP10276 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.73■□□□□ 0.91
RARAP10276 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RARAP10276 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RARAP10276 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RARAP10276 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RARAP10276 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RARAP10276 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.73■□□□□ 0.91
RARAP10276 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RARAP10276 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RARAP10276 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RARAP10276 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.72■□□□□ 0.91
RARAP10276 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RARAP10276 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RARAP10276 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.72■□□□□ 0.91
RARAP10276 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RARAP10276 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.72■□□□□ 0.91
RARAP10276 DUSP5P2-201ENST00000426873 1033 ntBASIC20.72■□□□□ 0.91
RARAP10276 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.72■□□□□ 0.91
RARAP10276 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.72■□□□□ 0.91
RARAP10276 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.72■□□□□ 0.91
RARAP10276 AC092118.2-201ENST00000613495 667 ntBASIC20.72■□□□□ 0.91
RARAP10276 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.72■□□□□ 0.91
RARAP10276 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.72■□□□□ 0.91
RARAP10276 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RARAP10276 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RARAP10276 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RARAP10276 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RARAP10276 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RARAP10276 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RARAP10276 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RARAP10276 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RARAP10276 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RARAP10276 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RARAP10276 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RARAP10276 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RARAP10276 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RARAP10276 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.71■□□□□ 0.91
RARAP10276 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RARAP10276 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.71■□□□□ 0.91
RARAP10276 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RARAP10276 SLC29A4P1-201ENST00000398760 971 ntBASIC20.71■□□□□ 0.91
RARAP10276 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RARAP10276 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.71■□□□□ 0.91
RARAP10276 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.71■□□□□ 0.91
RARAP10276 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RARAP10276 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.71■□□□□ 0.91
RARAP10276 AC009237.14-201ENST00000609975 1594 ntBASIC20.71■□□□□ 0.91
RARAP10276 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.71■□□□□ 0.91
RARAP10276 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RARAP10276 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RARAP10276 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RARAP10276 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RARAP10276 AP000974.1-201ENST00000623909 2387 ntBASIC20.7■□□□□ 0.9
RARAP10276 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RARAP10276 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RARAP10276 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.7■□□□□ 0.9
RARAP10276 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
RARAP10276 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RARAP10276 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.7■□□□□ 0.9
RARAP10276 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.7■□□□□ 0.9
RARAP10276 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RARAP10276 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
RARAP10276 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RARAP10276 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
RARAP10276 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RARAP10276 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RARAP10276 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RARAP10276 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RARAP10276 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RARAP10276 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RARAP10276 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
RARAP10276 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.69■□□□□ 0.9
RARAP10276 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RARAP10276 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RARAP10276 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RARAP10276 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RARAP10276 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
RARAP10276 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RARAP10276 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RARAP10276 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RARAP10276 AC091874.3-201ENST00000512672 1195 ntBASIC20.69■□□□□ 0.9
RARAP10276 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.69■□□□□ 0.9
RARAP10276 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.69■□□□□ 0.9
RARAP10276 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RARAP10276 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RARAP10276 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms