Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AL353708.3-201ENST00000610272 989 ntBASIC17.99■□□□□ 0.47
FREM3P0C091 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
FREM3P0C091 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
FREM3P0C091 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
FREM3P0C091 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.98■□□□□ 0.47
FREM3P0C091 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.98■□□□□ 0.47
FREM3P0C091 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
FREM3P0C091 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.98■□□□□ 0.47
FREM3P0C091 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.98■□□□□ 0.47
FREM3P0C091 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
FREM3P0C091 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.98■□□□□ 0.47
FREM3P0C091 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
FREM3P0C091 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
FREM3P0C091 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FREM3P0C091 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.98■□□□□ 0.47
FREM3P0C091 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FREM3P0C091 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FREM3P0C091 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
FREM3P0C091 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.98■□□□□ 0.47
FREM3P0C091 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.98■□□□□ 0.47
FREM3P0C091 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.98■□□□□ 0.47
FREM3P0C091 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
FREM3P0C091 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
FREM3P0C091 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
FREM3P0C091 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.98■□□□□ 0.47
FREM3P0C091 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.98■□□□□ 0.47
FREM3P0C091 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.98■□□□□ 0.47
FREM3P0C091 AP006294.2-201ENST00000641667 209 ntBASIC17.98■□□□□ 0.47
FREM3P0C091 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
FREM3P0C091 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FREM3P0C091 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FREM3P0C091 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
FREM3P0C091 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FREM3P0C091 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FREM3P0C091 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FREM3P0C091 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.97■□□□□ 0.47
FREM3P0C091 AL596275.1-201ENST00000423464 877 ntBASIC17.97■□□□□ 0.47
FREM3P0C091 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.97■□□□□ 0.47
FREM3P0C091 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.97■□□□□ 0.47
FREM3P0C091 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.97■□□□□ 0.47
FREM3P0C091 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
FREM3P0C091 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.97■□□□□ 0.47
FREM3P0C091 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FREM3P0C091 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
FREM3P0C091 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
FREM3P0C091 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FREM3P0C091 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FREM3P0C091 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
FREM3P0C091 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FREM3P0C091 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FREM3P0C091 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
FREM3P0C091 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.97■□□□□ 0.47
FREM3P0C091 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.97■□□□□ 0.47
FREM3P0C091 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
FREM3P0C091 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.96■□□□□ 0.47
FREM3P0C091 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FREM3P0C091 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FREM3P0C091 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.96■□□□□ 0.47
FREM3P0C091 AL049637.2-201ENST00000641778 930 ntBASIC17.96■□□□□ 0.47
FREM3P0C091 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
FREM3P0C091 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.96■□□□□ 0.47
FREM3P0C091 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
FREM3P0C091 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.96■□□□□ 0.47
FREM3P0C091 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.96■□□□□ 0.47
FREM3P0C091 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.96■□□□□ 0.47
FREM3P0C091 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
FREM3P0C091 AC018553.1-201ENST00000616682 1458 ntBASIC17.96■□□□□ 0.47
FREM3P0C091 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
FREM3P0C091 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.96■□□□□ 0.47
FREM3P0C091 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
FREM3P0C091 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
FREM3P0C091 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
FREM3P0C091 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.96■□□□□ 0.47
FREM3P0C091 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
FREM3P0C091 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FREM3P0C091 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
FREM3P0C091 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
FREM3P0C091 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.96■□□□□ 0.47
FREM3P0C091 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.96■□□□□ 0.47
FREM3P0C091 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
FREM3P0C091 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.96■□□□□ 0.47
FREM3P0C091 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
FREM3P0C091 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
FREM3P0C091 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.46
FREM3P0C091 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.96■□□□□ 0.46
FREM3P0C091 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
FREM3P0C091 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
FREM3P0C091 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FREM3P0C091 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
FREM3P0C091 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FREM3P0C091 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FREM3P0C091 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FREM3P0C091 YBX1P10-201ENST00000444752 975 ntBASIC17.95■□□□□ 0.46
FREM3P0C091 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.95■□□□□ 0.46
FREM3P0C091 MIR4497-201ENST00000583208 89 ntBASIC17.95■□□□□ 0.46
FREM3P0C091 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.95■□□□□ 0.46
FREM3P0C091 BX119927.1-201ENST00000636596 1552 ntBASIC17.95■□□□□ 0.46
FREM3P0C091 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FREM3P0C091 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
FREM3P0C091 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms