Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
CLTAP09496 PRKY-204ENST00000533551 1019 ntBASIC21.6■■□□□ 1.05
CLTAP09496 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.6■■□□□ 1.05
CLTAP09496 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLTAP09496 AL023875.1-201ENST00000640777 796 ntBASIC21.6■■□□□ 1.05
CLTAP09496 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.6■■□□□ 1.05
CLTAP09496 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.6■■□□□ 1.05
CLTAP09496 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CLTAP09496 BX119927.1-201ENST00000636596 1552 ntBASIC21.6■■□□□ 1.05
CLTAP09496 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLTAP09496 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CLTAP09496 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CLTAP09496 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
CLTAP09496 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLTAP09496 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.59■■□□□ 1.05
CLTAP09496 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.59■■□□□ 1.05
CLTAP09496 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CLTAP09496 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLTAP09496 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLTAP09496 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.59■■□□□ 1.05
CLTAP09496 AC239809.2-201ENST00000415381 517 ntBASIC21.59■■□□□ 1.05
CLTAP09496 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CLTAP09496 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.59■■□□□ 1.05
CLTAP09496 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CLTAP09496 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
CLTAP09496 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.59■■□□□ 1.05
CLTAP09496 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.59■■□□□ 1.05
CLTAP09496 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.59■■□□□ 1.05
CLTAP09496 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.59■■□□□ 1.05
CLTAP09496 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLTAP09496 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CLTAP09496 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CLTAP09496 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLTAP09496 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
CLTAP09496 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.59■■□□□ 1.05
CLTAP09496 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.59■■□□□ 1.05
CLTAP09496 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CLTAP09496 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLTAP09496 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLTAP09496 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLTAP09496 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
CLTAP09496 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLTAP09496 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.05
CLTAP09496 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CLTAP09496 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
CLTAP09496 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CLTAP09496 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLTAP09496 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CLTAP09496 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.58■■□□□ 1.05
CLTAP09496 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
CLTAP09496 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CLTAP09496 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.58■■□□□ 1.05
CLTAP09496 AC133681.1-201ENST00000465482 601 ntBASIC21.58■■□□□ 1.05
CLTAP09496 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.58■■□□□ 1.05
CLTAP09496 AC124016.1-201ENST00000609552 612 ntBASIC21.58■■□□□ 1.05
CLTAP09496 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.58■■□□□ 1.04
CLTAP09496 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
CLTAP09496 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.58■■□□□ 1.04
CLTAP09496 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CLTAP09496 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
CLTAP09496 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.57■■□□□ 1.04
CLTAP09496 AC099778.1-201ENST00000568593 1911 ntBASIC21.57■■□□□ 1.04
CLTAP09496 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLTAP09496 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
CLTAP09496 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.57■■□□□ 1.04
CLTAP09496 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLTAP09496 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.57■■□□□ 1.04
CLTAP09496 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CLTAP09496 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.57■■□□□ 1.04
CLTAP09496 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.57■■□□□ 1.04
CLTAP09496 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.57■■□□□ 1.04
CLTAP09496 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.57■■□□□ 1.04
CLTAP09496 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CLTAP09496 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.57■■□□□ 1.04
CLTAP09496 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CLTAP09496 FAM197Y4-202ENST00000622692 608 ntBASIC21.57■■□□□ 1.04
CLTAP09496 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.57■■□□□ 1.04
CLTAP09496 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CLTAP09496 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLTAP09496 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.57■■□□□ 1.04
CLTAP09496 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLTAP09496 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.56■■□□□ 1.04
CLTAP09496 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CLTAP09496 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.56■■□□□ 1.04
CLTAP09496 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
CLTAP09496 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.56■■□□□ 1.04
CLTAP09496 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
CLTAP09496 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLTAP09496 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.56■■□□□ 1.04
CLTAP09496 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.56■■□□□ 1.04
CLTAP09496 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CLTAP09496 KRASP1-201ENST00000407852 552 ntBASIC21.56■■□□□ 1.04
CLTAP09496 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.56■■□□□ 1.04
CLTAP09496 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.56■■□□□ 1.04
CLTAP09496 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CLTAP09496 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.56■■□□□ 1.04
CLTAP09496 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.56■■□□□ 1.04
CLTAP09496 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.56■■□□□ 1.04
CLTAP09496 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CLTAP09496 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms