Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.66■□□□□ 0.74
CAPNS1P04632 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CAPNS1P04632 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CAPNS1P04632 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
CAPNS1P04632 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CAPNS1P04632 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.66■□□□□ 0.74
CAPNS1P04632 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.66■□□□□ 0.74
CAPNS1P04632 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CAPNS1P04632 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CAPNS1P04632 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CAPNS1P04632 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CAPNS1P04632 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CAPNS1P04632 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
CAPNS1P04632 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CAPNS1P04632 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CAPNS1P04632 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.65■□□□□ 0.74
CAPNS1P04632 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.65■□□□□ 0.74
CAPNS1P04632 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.65■□□□□ 0.74
CAPNS1P04632 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CAPNS1P04632 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.65■□□□□ 0.74
CAPNS1P04632 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.65■□□□□ 0.74
CAPNS1P04632 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CAPNS1P04632 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.65■□□□□ 0.74
CAPNS1P04632 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.65■□□□□ 0.74
CAPNS1P04632 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CAPNS1P04632 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CAPNS1P04632 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
CAPNS1P04632 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CAPNS1P04632 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.65■□□□□ 0.74
CAPNS1P04632 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CAPNS1P04632 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CAPNS1P04632 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.65■□□□□ 0.74
CAPNS1P04632 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.64■□□□□ 0.74
CAPNS1P04632 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CAPNS1P04632 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.64■□□□□ 0.74
CAPNS1P04632 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.64■□□□□ 0.74
CAPNS1P04632 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
CAPNS1P04632 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CAPNS1P04632 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CAPNS1P04632 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CAPNS1P04632 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.64■□□□□ 0.73
CAPNS1P04632 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
CAPNS1P04632 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.64■□□□□ 0.73
CAPNS1P04632 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.64■□□□□ 0.73
CAPNS1P04632 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.64■□□□□ 0.73
CAPNS1P04632 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CAPNS1P04632 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CAPNS1P04632 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CAPNS1P04632 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CAPNS1P04632 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.64■□□□□ 0.73
CAPNS1P04632 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CAPNS1P04632 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CAPNS1P04632 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CAPNS1P04632 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CAPNS1P04632 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.63■□□□□ 0.73
CAPNS1P04632 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CAPNS1P04632 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.63■□□□□ 0.73
CAPNS1P04632 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.63■□□□□ 0.73
CAPNS1P04632 MMP23A-201ENST00000234610 1017 ntBASIC19.63■□□□□ 0.73
CAPNS1P04632 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.63■□□□□ 0.73
CAPNS1P04632 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.63■□□□□ 0.73
CAPNS1P04632 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CAPNS1P04632 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.63■□□□□ 0.73
CAPNS1P04632 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.63■□□□□ 0.73
CAPNS1P04632 AC145285.6-201ENST00000604632 637 ntBASIC19.63■□□□□ 0.73
CAPNS1P04632 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.63■□□□□ 0.73
CAPNS1P04632 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CAPNS1P04632 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.63■□□□□ 0.73
CAPNS1P04632 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CAPNS1P04632 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.63■□□□□ 0.73
CAPNS1P04632 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.63■□□□□ 0.73
CAPNS1P04632 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CAPNS1P04632 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.62■□□□□ 0.73
CAPNS1P04632 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CAPNS1P04632 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CAPNS1P04632 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CAPNS1P04632 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CAPNS1P04632 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.62■□□□□ 0.73
CAPNS1P04632 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.62■□□□□ 0.73
CAPNS1P04632 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CAPNS1P04632 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CAPNS1P04632 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CAPNS1P04632 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CAPNS1P04632 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CAPNS1P04632 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.62■□□□□ 0.73
CAPNS1P04632 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CAPNS1P04632 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
CAPNS1P04632 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.62■□□□□ 0.73
CAPNS1P04632 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.62■□□□□ 0.73
CAPNS1P04632 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.62■□□□□ 0.73
CAPNS1P04632 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.62■□□□□ 0.73
CAPNS1P04632 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.62■□□□□ 0.73
CAPNS1P04632 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CAPNS1P04632 AL512408.1-201ENST00000569378 2000 ntBASIC19.62■□□□□ 0.73
CAPNS1P04632 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CAPNS1P04632 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CAPNS1P04632 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CAPNS1P04632 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CAPNS1P04632 AC007225.1-201ENST00000566331 1836 ntBASIC19.62■□□□□ 0.73
CAPNS1P04632 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms