Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
HLA-DQA1P01909 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
HLA-DQA1P01909 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC14.86□□□□□ -0.03
HLA-DQA1P01909 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DQA1P01909 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DQA1P01909 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC14.86□□□□□ -0.03
HLA-DQA1P01909 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DQA1P01909 AC104581.1-202ENST00000635932 2618 ntBASIC14.85□□□□□ -0.03
HLA-DQA1P01909 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DQA1P01909 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DQA1P01909 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DQA1P01909 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
HLA-DQA1P01909 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DQA1P01909 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DQA1P01909 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
HLA-DQA1P01909 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC14.85□□□□□ -0.03
HLA-DQA1P01909 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DQA1P01909 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC14.85□□□□□ -0.03
HLA-DQA1P01909 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DQA1P01909 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DQA1P01909 RPP21-222ENST00000433076 577 ntTSL 2 BASIC14.85□□□□□ -0.03
HLA-DQA1P01909 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC14.85□□□□□ -0.03
HLA-DQA1P01909 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DQA1P01909 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC14.85□□□□□ -0.03
HLA-DQA1P01909 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC14.85□□□□□ -0.03
HLA-DQA1P01909 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DQA1P01909 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DQA1P01909 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC14.85□□□□□ -0.03
HLA-DQA1P01909 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DQA1P01909 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
HLA-DQA1P01909 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
HLA-DQA1P01909 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC14.85□□□□□ -0.03
HLA-DQA1P01909 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
HLA-DQA1P01909 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DQA1P01909 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DQA1P01909 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
HLA-DQA1P01909 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQA1P01909 AL133373.2-201ENST00000623187 2828 ntBASIC14.84□□□□□ -0.03
HLA-DQA1P01909 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-DQA1P01909 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
HLA-DQA1P01909 CD37-204ENST00000535669 1674 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-DQA1P01909 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
HLA-DQA1P01909 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQA1P01909 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
HLA-DQA1P01909 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQA1P01909 NOC2LP1-202ENST00000452600 2235 ntBASIC14.84□□□□□ -0.03
HLA-DQA1P01909 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQA1P01909 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQA1P01909 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQA1P01909 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC14.84□□□□□ -0.03
HLA-DQA1P01909 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC14.84□□□□□ -0.03
HLA-DQA1P01909 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQA1P01909 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQA1P01909 TP73-202ENST00000354437 2140 ntTSL 5 BASIC14.84□□□□□ -0.03
HLA-DQA1P01909 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-DQA1P01909 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQA1P01909 NOC2LP2-201ENST00000407594 1944 ntBASIC14.84□□□□□ -0.03
HLA-DQA1P01909 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
HLA-DQA1P01909 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQA1P01909 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-DQA1P01909 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC14.84□□□□□ -0.03
HLA-DQA1P01909 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC14.83□□□□□ -0.03
HLA-DQA1P01909 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-DQA1P01909 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
HLA-DQA1P01909 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DQA1P01909 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC14.83□□□□□ -0.04
HLA-DQA1P01909 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DQA1P01909 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DQA1P01909 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DQA1P01909 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
HLA-DQA1P01909 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DQA1P01909 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DQA1P01909 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DQA1P01909 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DQA1P01909 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC14.83□□□□□ -0.04
HLA-DQA1P01909 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DQA1P01909 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DQA1P01909 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC14.83□□□□□ -0.04
HLA-DQA1P01909 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC14.83□□□□□ -0.04
HLA-DQA1P01909 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC14.83□□□□□ -0.04
HLA-DQA1P01909 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DQA1P01909 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC14.83□□□□□ -0.04
HLA-DQA1P01909 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DQA1P01909 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DQA1P01909 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DQA1P01909 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC14.83□□□□□ -0.04
HLA-DQA1P01909 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC14.83□□□□□ -0.04
HLA-DQA1P01909 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC14.83□□□□□ -0.04
HLA-DQA1P01909 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC14.83□□□□□ -0.04
HLA-DQA1P01909 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DQA1P01909 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DQA1P01909 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DQA1P01909 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
HLA-DQA1P01909 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC14.82□□□□□ -0.04
HLA-DQA1P01909 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC14.82□□□□□ -0.04
HLA-DQA1P01909 PKD1P1-201ENST00000458669 6805 ntBASIC14.82□□□□□ -0.04
HLA-DQA1P01909 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DQA1P01909 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DQA1P01909 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DQA1P01909 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms