Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
HLA-DRAP01903 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.28■■□□□ 1
HLA-DRAP01903 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HLA-DRAP01903 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.28■■□□□ 1
HLA-DRAP01903 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.28■■□□□ 1
HLA-DRAP01903 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.28■■□□□ 1
HLA-DRAP01903 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HLA-DRAP01903 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HLA-DRAP01903 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
HLA-DRAP01903 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
HLA-DRAP01903 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.27■■□□□ 1
HLA-DRAP01903 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HLA-DRAP01903 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
HLA-DRAP01903 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.27■■□□□ 1
HLA-DRAP01903 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.27■■□□□ 1
HLA-DRAP01903 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
HLA-DRAP01903 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.27■■□□□ 1
HLA-DRAP01903 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
HLA-DRAP01903 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.27■■□□□ 1
HLA-DRAP01903 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.27■■□□□ 1
HLA-DRAP01903 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.27■■□□□ 1
HLA-DRAP01903 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HLA-DRAP01903 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HLA-DRAP01903 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.27■■□□□ 1
HLA-DRAP01903 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
HLA-DRAP01903 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
HLA-DRAP01903 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
HLA-DRAP01903 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.27■□□□□ 0.99
HLA-DRAP01903 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
HLA-DRAP01903 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
HLA-DRAP01903 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-DRAP01903 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-DRAP01903 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-DRAP01903 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-DRAP01903 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-DRAP01903 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
HLA-DRAP01903 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-DRAP01903 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-DRAP01903 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.26■□□□□ 0.99
HLA-DRAP01903 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.26■□□□□ 0.99
HLA-DRAP01903 KRT17P3-201ENST00000420566 1262 ntBASIC21.26■□□□□ 0.99
HLA-DRAP01903 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-DRAP01903 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-DRAP01903 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.26■□□□□ 0.99
HLA-DRAP01903 AC069544.1-201ENST00000609399 999 ntBASIC21.26■□□□□ 0.99
HLA-DRAP01903 AL121829.2-201ENST00000620908 328 ntBASIC21.26■□□□□ 0.99
HLA-DRAP01903 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-DRAP01903 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-DRAP01903 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-DRAP01903 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HLA-DRAP01903 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.26■□□□□ 0.99
HLA-DRAP01903 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HLA-DRAP01903 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.25■□□□□ 0.99
HLA-DRAP01903 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HLA-DRAP01903 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.25■□□□□ 0.99
HLA-DRAP01903 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HLA-DRAP01903 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HLA-DRAP01903 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
HLA-DRAP01903 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.25■□□□□ 0.99
HLA-DRAP01903 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.25■□□□□ 0.99
HLA-DRAP01903 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HLA-DRAP01903 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
HLA-DRAP01903 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HLA-DRAP01903 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.25■□□□□ 0.99
HLA-DRAP01903 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.25■□□□□ 0.99
HLA-DRAP01903 POU5F1P3-201ENST00000428824 1078 ntBASIC21.25■□□□□ 0.99
HLA-DRAP01903 TSPY20P-201ENST00000450910 630 ntBASIC21.25■□□□□ 0.99
HLA-DRAP01903 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.25■□□□□ 0.99
HLA-DRAP01903 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.25■□□□□ 0.99
HLA-DRAP01903 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HLA-DRAP01903 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.25■□□□□ 0.99
HLA-DRAP01903 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
HLA-DRAP01903 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.25■□□□□ 0.99
HLA-DRAP01903 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HLA-DRAP01903 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HLA-DRAP01903 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HLA-DRAP01903 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HLA-DRAP01903 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HLA-DRAP01903 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
HLA-DRAP01903 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HLA-DRAP01903 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HLA-DRAP01903 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.24■□□□□ 0.99
HLA-DRAP01903 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HLA-DRAP01903 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HLA-DRAP01903 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
HLA-DRAP01903 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HLA-DRAP01903 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
HLA-DRAP01903 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.24■□□□□ 0.99
HLA-DRAP01903 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.24■□□□□ 0.99
HLA-DRAP01903 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.24■□□□□ 0.99
HLA-DRAP01903 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.24■□□□□ 0.99
HLA-DRAP01903 AC006058.3-201ENST00000606217 1069 ntBASIC21.24■□□□□ 0.99
HLA-DRAP01903 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HLA-DRAP01903 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.24■□□□□ 0.99
HLA-DRAP01903 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HLA-DRAP01903 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
HLA-DRAP01903 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.24■□□□□ 0.99
HLA-DRAP01903 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
HLA-DRAP01903 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HLA-DRAP01903 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms