Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CD4P01730 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CD4P01730 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CD4P01730 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CD4P01730 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CD4P01730 GUK1-204ENST00000366721 689 ntTSL 3 BASIC21.89■■□□□ 1.09
CD4P01730 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.89■■□□□ 1.09
CD4P01730 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
CD4P01730 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21.89■■□□□ 1.09
CD4P01730 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21.89■■□□□ 1.09
CD4P01730 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.89■■□□□ 1.09
CD4P01730 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
CD4P01730 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.89■■□□□ 1.09
CD4P01730 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.89■■□□□ 1.09
CD4P01730 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.89■■□□□ 1.09
CD4P01730 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.89■■□□□ 1.09
CD4P01730 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CD4P01730 KRT8P17-201ENST00000453110 1448 ntBASIC21.89■■□□□ 1.09
CD4P01730 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
CD4P01730 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CD4P01730 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
CD4P01730 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CD4P01730 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CD4P01730 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CD4P01730 ATP5G1P1-201ENST00000448724 379 ntBASIC21.88■■□□□ 1.09
CD4P01730 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CD4P01730 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CD4P01730 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CD4P01730 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.88■■□□□ 1.09
CD4P01730 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.88■■□□□ 1.09
CD4P01730 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CD4P01730 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CD4P01730 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CD4P01730 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CD4P01730 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CD4P01730 AP006587.1-201ENST00000534129 1502 ntBASIC21.87■■□□□ 1.09
CD4P01730 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CD4P01730 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
CD4P01730 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CD4P01730 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CD4P01730 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CD4P01730 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CD4P01730 AC004980.1-204ENST00000429707 299 ntBASIC21.87■■□□□ 1.09
CD4P01730 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CD4P01730 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.87■■□□□ 1.09
CD4P01730 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.87■■□□□ 1.09
CD4P01730 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CD4P01730 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.87■■□□□ 1.09
CD4P01730 AC006128.1-201ENST00000624704 1661 ntBASIC21.87■■□□□ 1.09
CD4P01730 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
CD4P01730 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CD4P01730 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.87■■□□□ 1.09
CD4P01730 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CD4P01730 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CD4P01730 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CD4P01730 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.86■■□□□ 1.09
CD4P01730 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.86■■□□□ 1.09
CD4P01730 INGX-201ENST00000359239 846 ntBASIC21.86■■□□□ 1.09
CD4P01730 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
CD4P01730 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.86■■□□□ 1.09
CD4P01730 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC21.86■■□□□ 1.09
CD4P01730 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC21.86■■□□□ 1.09
CD4P01730 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.86■■□□□ 1.09
CD4P01730 FAM87A-204ENST00000613235 858 ntBASIC21.86■■□□□ 1.09
CD4P01730 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.86■■□□□ 1.09
CD4P01730 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.86■■□□□ 1.09
CD4P01730 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CD4P01730 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CD4P01730 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CD4P01730 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CD4P01730 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.86■■□□□ 1.09
CD4P01730 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CD4P01730 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CD4P01730 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
CD4P01730 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CD4P01730 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
CD4P01730 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
CD4P01730 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.85■■□□□ 1.09
CD4P01730 AC097488.1-201ENST00000507834 756 ntBASIC21.85■■□□□ 1.09
CD4P01730 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.85■■□□□ 1.09
CD4P01730 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
CD4P01730 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.85■■□□□ 1.09
CD4P01730 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
CD4P01730 AC005229.4-201ENST00000610085 2198 ntBASIC21.85■■□□□ 1.09
CD4P01730 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CD4P01730 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CD4P01730 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC21.84■■□□□ 1.09
CD4P01730 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.84■■□□□ 1.09
CD4P01730 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CD4P01730 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.84■■□□□ 1.09
CD4P01730 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CD4P01730 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
CD4P01730 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CD4P01730 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CD4P01730 BX664615.1-201ENST00000443558 458 ntBASIC21.84■■□□□ 1.09
CD4P01730 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.84■■□□□ 1.09
CD4P01730 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CD4P01730 AC128688.1-201ENST00000487626 519 ntBASIC21.84■■□□□ 1.09
CD4P01730 AC063952.2-201ENST00000498792 1227 ntBASIC21.84■■□□□ 1.09
CD4P01730 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms