Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC22.67■■□□□ 1.22
ALDH1A1P00352 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC22.67■■□□□ 1.22
ALDH1A1P00352 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC22.67■■□□□ 1.22
ALDH1A1P00352 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
ALDH1A1P00352 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
ALDH1A1P00352 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ALDH1A1P00352 TUB-203ENST00000534099 1759 ntTSL 2 BASIC22.66■■□□□ 1.22
ALDH1A1P00352 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
ALDH1A1P00352 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ALDH1A1P00352 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ALDH1A1P00352 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ALDH1A1P00352 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
ALDH1A1P00352 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ALDH1A1P00352 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ALDH1A1P00352 AP000523.1-201ENST00000398242 1049 ntBASIC22.66■■□□□ 1.22
ALDH1A1P00352 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ALDH1A1P00352 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC22.66■■□□□ 1.22
ALDH1A1P00352 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC22.66■■□□□ 1.22
ALDH1A1P00352 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ALDH1A1P00352 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
ALDH1A1P00352 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
ALDH1A1P00352 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
ALDH1A1P00352 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
ALDH1A1P00352 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
ALDH1A1P00352 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
ALDH1A1P00352 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
ALDH1A1P00352 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ALDH1A1P00352 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
ALDH1A1P00352 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
ALDH1A1P00352 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
ALDH1A1P00352 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ALDH1A1P00352 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
ALDH1A1P00352 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ALDH1A1P00352 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
ALDH1A1P00352 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC22.65■■□□□ 1.22
ALDH1A1P00352 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC22.65■■□□□ 1.22
ALDH1A1P00352 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC22.65■■□□□ 1.22
ALDH1A1P00352 ETFA-216ENST00000560726 942 ntTSL 3 BASIC22.65■■□□□ 1.22
ALDH1A1P00352 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC22.65■■□□□ 1.22
ALDH1A1P00352 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
ALDH1A1P00352 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC22.64■■□□□ 1.22
ALDH1A1P00352 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
ALDH1A1P00352 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC22.64■■□□□ 1.22
ALDH1A1P00352 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
ALDH1A1P00352 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC22.64■■□□□ 1.22
ALDH1A1P00352 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
ALDH1A1P00352 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
ALDH1A1P00352 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ALDH1A1P00352 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ALDH1A1P00352 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
ALDH1A1P00352 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC22.64■■□□□ 1.21
ALDH1A1P00352 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC22.64■■□□□ 1.21
ALDH1A1P00352 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC22.64■■□□□ 1.21
ALDH1A1P00352 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC22.64■■□□□ 1.21
ALDH1A1P00352 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC22.64■■□□□ 1.21
ALDH1A1P00352 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ALDH1A1P00352 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC22.64■■□□□ 1.21
ALDH1A1P00352 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ALDH1A1P00352 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC22.64■■□□□ 1.21
ALDH1A1P00352 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ALDH1A1P00352 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
ALDH1A1P00352 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ALDH1A1P00352 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ALDH1A1P00352 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
ALDH1A1P00352 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.63■■□□□ 1.21
ALDH1A1P00352 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
ALDH1A1P00352 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ALDH1A1P00352 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC22.63■■□□□ 1.21
ALDH1A1P00352 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
ALDH1A1P00352 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ALDH1A1P00352 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ALDH1A1P00352 AC018553.1-201ENST00000616682 1458 ntBASIC22.63■■□□□ 1.21
ALDH1A1P00352 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ALDH1A1P00352 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
ALDH1A1P00352 DERL1-203ENST00000419562 918 ntTSL 2 BASIC22.63■■□□□ 1.21
ALDH1A1P00352 KRT18P38-201ENST00000449496 1282 ntBASIC22.63■■□□□ 1.21
ALDH1A1P00352 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC22.63■■□□□ 1.21
ALDH1A1P00352 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC22.63■■□□□ 1.21
ALDH1A1P00352 ZNF444P1-201ENST00000559497 298 ntBASIC22.63■■□□□ 1.21
ALDH1A1P00352 AC012313.10-201ENST00000623509 926 ntBASIC22.63■■□□□ 1.21
ALDH1A1P00352 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC22.63■■□□□ 1.21
ALDH1A1P00352 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC22.63■■□□□ 1.21
ALDH1A1P00352 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC22.63■■□□□ 1.21
ALDH1A1P00352 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ALDH1A1P00352 H19-201ENST00000411754 1788 ntTSL 5 BASIC22.63■■□□□ 1.21
ALDH1A1P00352 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ALDH1A1P00352 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC22.62■■□□□ 1.21
ALDH1A1P00352 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC22.62■■□□□ 1.21
ALDH1A1P00352 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
ALDH1A1P00352 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ALDH1A1P00352 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ALDH1A1P00352 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC22.62■■□□□ 1.21
ALDH1A1P00352 LY6E-213ENST00000522528 606 ntTSL 3 BASIC22.62■■□□□ 1.21
ALDH1A1P00352 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC22.62■■□□□ 1.21
ALDH1A1P00352 KLK8-205ENST00000593490 267 ntTSL 3 BASIC22.62■■□□□ 1.21
ALDH1A1P00352 KRT16P6-202ENST00000425692 1426 ntBASIC22.62■■□□□ 1.21
ALDH1A1P00352 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
ALDH1A1P00352 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
ALDH1A1P00352 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
ALDH1A1P00352 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms