Protein–RNA interactions for Protein: O95521

PRAMEF1, PRAME family member 1, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1O95521 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRAMEF1O95521 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.68■□□□□ 0.74
PRAMEF1O95521 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.68■□□□□ 0.74
PRAMEF1O95521 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.68■□□□□ 0.74
PRAMEF1O95521 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.68■□□□□ 0.74
PRAMEF1O95521 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRAMEF1O95521 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRAMEF1O95521 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRAMEF1O95521 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PRAMEF1O95521 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PRAMEF1O95521 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRAMEF1O95521 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRAMEF1O95521 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PRAMEF1O95521 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.67■□□□□ 0.74
PRAMEF1O95521 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PRAMEF1O95521 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
PRAMEF1O95521 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.67■□□□□ 0.74
PRAMEF1O95521 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.67■□□□□ 0.74
PRAMEF1O95521 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
PRAMEF1O95521 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.67■□□□□ 0.74
PRAMEF1O95521 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PRAMEF1O95521 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PRAMEF1O95521 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PRAMEF1O95521 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PRAMEF1O95521 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PRAMEF1O95521 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEF1O95521 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEF1O95521 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.66■□□□□ 0.74
PRAMEF1O95521 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.66■□□□□ 0.74
PRAMEF1O95521 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.66■□□□□ 0.74
PRAMEF1O95521 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PRAMEF1O95521 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEF1O95521 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEF1O95521 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEF1O95521 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.66■□□□□ 0.74
PRAMEF1O95521 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEF1O95521 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.66■□□□□ 0.74
PRAMEF1O95521 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEF1O95521 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEF1O95521 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEF1O95521 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEF1O95521 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEF1O95521 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEF1O95521 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEF1O95521 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEF1O95521 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEF1O95521 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEF1O95521 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEF1O95521 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRAMEF1O95521 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PRAMEF1O95521 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.65■□□□□ 0.74
PRAMEF1O95521 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRAMEF1O95521 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PRAMEF1O95521 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.65■□□□□ 0.74
PRAMEF1O95521 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.65■□□□□ 0.74
PRAMEF1O95521 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.65■□□□□ 0.74
PRAMEF1O95521 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PRAMEF1O95521 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PRAMEF1O95521 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRAMEF1O95521 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
PRAMEF1O95521 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.65■□□□□ 0.74
PRAMEF1O95521 KRT17P3-201ENST00000420566 1262 ntBASIC19.65■□□□□ 0.74
PRAMEF1O95521 POU5F1P3-201ENST00000428824 1078 ntBASIC19.65■□□□□ 0.74
PRAMEF1O95521 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.65■□□□□ 0.74
PRAMEF1O95521 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PRAMEF1O95521 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.65■□□□□ 0.74
PRAMEF1O95521 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRAMEF1O95521 AC069544.1-201ENST00000609399 999 ntBASIC19.65■□□□□ 0.74
PRAMEF1O95521 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PRAMEF1O95521 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRAMEF1O95521 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
PRAMEF1O95521 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRAMEF1O95521 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PRAMEF1O95521 TFP1-202ENST00000475455 1573 ntBASIC19.65■□□□□ 0.74
PRAMEF1O95521 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRAMEF1O95521 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRAMEF1O95521 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRAMEF1O95521 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.65■□□□□ 0.74
PRAMEF1O95521 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PRAMEF1O95521 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.64■□□□□ 0.74
PRAMEF1O95521 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
PRAMEF1O95521 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.64■□□□□ 0.73
PRAMEF1O95521 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.64■□□□□ 0.73
PRAMEF1O95521 AL121829.2-201ENST00000620908 328 ntBASIC19.64■□□□□ 0.73
PRAMEF1O95521 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.64■□□□□ 0.73
PRAMEF1O95521 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PRAMEF1O95521 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.64■□□□□ 0.73
PRAMEF1O95521 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.64■□□□□ 0.73
PRAMEF1O95521 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRAMEF1O95521 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.64■□□□□ 0.73
PRAMEF1O95521 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRAMEF1O95521 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRAMEF1O95521 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
PRAMEF1O95521 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRAMEF1O95521 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PRAMEF1O95521 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.63■□□□□ 0.73
PRAMEF1O95521 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PRAMEF1O95521 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PRAMEF1O95521 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRAMEF1O95521 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms