Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RTN3O95197 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTN3O95197 AC116351.2-201ENST00000606540 1585 ntBASIC20.81■□□□□ 0.92
RTN3O95197 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTN3O95197 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTN3O95197 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTN3O95197 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RTN3O95197 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RTN3O95197 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RTN3O95197 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.81■□□□□ 0.92
RTN3O95197 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTN3O95197 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
RTN3O95197 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.81■□□□□ 0.92
RTN3O95197 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RTN3O95197 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTN3O95197 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTN3O95197 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTN3O95197 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTN3O95197 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTN3O95197 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.8■□□□□ 0.92
RTN3O95197 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RTN3O95197 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTN3O95197 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTN3O95197 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RTN3O95197 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RTN3O95197 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTN3O95197 RPS2P55-201ENST00000397318 883 ntBASIC20.8■□□□□ 0.92
RTN3O95197 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.8■□□□□ 0.92
RTN3O95197 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RTN3O95197 AC107956.1-201ENST00000494359 873 ntBASIC20.8■□□□□ 0.92
RTN3O95197 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RTN3O95197 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.8■□□□□ 0.92
RTN3O95197 AP001412.1-201ENST00000608405 714 ntBASIC20.8■□□□□ 0.92
RTN3O95197 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
RTN3O95197 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTN3O95197 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTN3O95197 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RTN3O95197 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTN3O95197 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RTN3O95197 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RTN3O95197 BX119927.1-201ENST00000636596 1552 ntBASIC20.8■□□□□ 0.92
RTN3O95197 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTN3O95197 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTN3O95197 AP005212.1-201ENST00000581547 1997 ntBASIC20.79■□□□□ 0.92
RTN3O95197 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.79■□□□□ 0.92
RTN3O95197 PHGDH-210ENST00000641115 1638 ntBASIC20.79■□□□□ 0.92
RTN3O95197 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RTN3O95197 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
RTN3O95197 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RTN3O95197 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTN3O95197 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTN3O95197 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.79■□□□□ 0.92
RTN3O95197 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RTN3O95197 AC233702.5-201ENST00000584107 538 ntBASIC20.79■□□□□ 0.92
RTN3O95197 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RTN3O95197 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTN3O95197 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.79■□□□□ 0.92
RTN3O95197 AC073314.1-201ENST00000568729 2216 ntBASIC20.79■□□□□ 0.92
RTN3O95197 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTN3O95197 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RTN3O95197 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTN3O95197 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.79■□□□□ 0.92
RTN3O95197 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RTN3O95197 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.78■□□□□ 0.92
RTN3O95197 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTN3O95197 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RTN3O95197 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTN3O95197 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTN3O95197 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RTN3O95197 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTN3O95197 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.78■□□□□ 0.92
RTN3O95197 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RTN3O95197 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RTN3O95197 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.78■□□□□ 0.92
RTN3O95197 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTN3O95197 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTN3O95197 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RTN3O95197 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTN3O95197 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
RTN3O95197 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RTN3O95197 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.78■□□□□ 0.92
RTN3O95197 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.78■□□□□ 0.92
RTN3O95197 AC018553.1-201ENST00000616682 1458 ntBASIC20.78■□□□□ 0.92
RTN3O95197 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTN3O95197 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTN3O95197 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTN3O95197 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
RTN3O95197 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTN3O95197 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RTN3O95197 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTN3O95197 AL596275.1-201ENST00000423464 877 ntBASIC20.78■□□□□ 0.92
RTN3O95197 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RTN3O95197 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.78■□□□□ 0.92
RTN3O95197 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.78■□□□□ 0.92
RTN3O95197 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.78■□□□□ 0.92
RTN3O95197 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTN3O95197 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.78■□□□□ 0.92
RTN3O95197 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTN3O95197 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.78■□□□□ 0.92
RTN3O95197 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms