Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SOX30O94993 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SOX30O94993 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.38■□□□□ 0.53
SOX30O94993 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SOX30O94993 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.38■□□□□ 0.53
SOX30O94993 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.38■□□□□ 0.53
SOX30O94993 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SOX30O94993 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.38■□□□□ 0.53
SOX30O94993 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SOX30O94993 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.38■□□□□ 0.53
SOX30O94993 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.38■□□□□ 0.53
SOX30O94993 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.38■□□□□ 0.53
SOX30O94993 AL109923.1-201ENST00000618799 583 ntBASIC18.38■□□□□ 0.53
SOX30O94993 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.38■□□□□ 0.53
SOX30O94993 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SOX30O94993 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
SOX30O94993 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.38■□□□□ 0.53
SOX30O94993 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SOX30O94993 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SOX30O94993 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SOX30O94993 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SOX30O94993 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
SOX30O94993 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SOX30O94993 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SOX30O94993 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.37■□□□□ 0.53
SOX30O94993 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SOX30O94993 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SOX30O94993 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SOX30O94993 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
SOX30O94993 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SOX30O94993 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SOX30O94993 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SOX30O94993 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SOX30O94993 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SOX30O94993 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SOX30O94993 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SOX30O94993 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.37■□□□□ 0.53
SOX30O94993 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.37■□□□□ 0.53
SOX30O94993 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.37■□□□□ 0.53
SOX30O94993 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.37■□□□□ 0.53
SOX30O94993 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.37■□□□□ 0.53
SOX30O94993 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SOX30O94993 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SOX30O94993 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.37■□□□□ 0.53
SOX30O94993 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.37■□□□□ 0.53
SOX30O94993 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SOX30O94993 AC116351.2-201ENST00000606540 1585 ntBASIC18.37■□□□□ 0.53
SOX30O94993 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.37■□□□□ 0.53
SOX30O94993 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SOX30O94993 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SOX30O94993 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
SOX30O94993 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.37■□□□□ 0.53
SOX30O94993 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SOX30O94993 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SOX30O94993 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SOX30O94993 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.37■□□□□ 0.53
SOX30O94993 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.37■□□□□ 0.53
SOX30O94993 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SOX30O94993 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SOX30O94993 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SOX30O94993 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SOX30O94993 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SOX30O94993 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SOX30O94993 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.36■□□□□ 0.53
SOX30O94993 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SOX30O94993 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SOX30O94993 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.36■□□□□ 0.53
SOX30O94993 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.36■□□□□ 0.53
SOX30O94993 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.36■□□□□ 0.53
SOX30O94993 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SOX30O94993 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.36■□□□□ 0.53
SOX30O94993 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.36■□□□□ 0.53
SOX30O94993 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SOX30O94993 AC142086.2-201ENST00000569753 217 ntBASIC18.36■□□□□ 0.53
SOX30O94993 AC060766.5-201ENST00000590539 871 ntBASIC18.36■□□□□ 0.53
SOX30O94993 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.36■□□□□ 0.53
SOX30O94993 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SOX30O94993 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SOX30O94993 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SOX30O94993 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.35■□□□□ 0.53
SOX30O94993 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.35■□□□□ 0.53
SOX30O94993 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SOX30O94993 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SOX30O94993 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SOX30O94993 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SOX30O94993 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SOX30O94993 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SOX30O94993 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.35■□□□□ 0.53
SOX30O94993 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SOX30O94993 AL355802.2-201ENST00000402069 882 ntBASIC18.35■□□□□ 0.53
SOX30O94993 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.35■□□□□ 0.53
SOX30O94993 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.35■□□□□ 0.53
SOX30O94993 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.35■□□□□ 0.53
SOX30O94993 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.35■□□□□ 0.53
SOX30O94993 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.35■□□□□ 0.53
SOX30O94993 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.35■□□□□ 0.53
SOX30O94993 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SOX30O94993 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.35■□□□□ 0.53
SOX30O94993 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SOX30O94993 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms