Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
BEST1O76090 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
BEST1O76090 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.8■□□□□ 0.92
BEST1O76090 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
BEST1O76090 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BEST1O76090 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
BEST1O76090 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.8■□□□□ 0.92
BEST1O76090 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
BEST1O76090 AP006294.2-201ENST00000641667 209 ntBASIC20.8■□□□□ 0.92
BEST1O76090 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
BEST1O76090 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
BEST1O76090 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.8■□□□□ 0.92
BEST1O76090 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BEST1O76090 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
BEST1O76090 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BEST1O76090 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
BEST1O76090 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
BEST1O76090 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
BEST1O76090 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.79■□□□□ 0.92
BEST1O76090 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BEST1O76090 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BEST1O76090 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
BEST1O76090 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
BEST1O76090 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.79■□□□□ 0.92
BEST1O76090 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BEST1O76090 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
BEST1O76090 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BEST1O76090 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.79■□□□□ 0.92
BEST1O76090 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BEST1O76090 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BEST1O76090 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
BEST1O76090 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.79■□□□□ 0.92
BEST1O76090 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
BEST1O76090 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.78■□□□□ 0.92
BEST1O76090 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.78■□□□□ 0.92
BEST1O76090 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.78■□□□□ 0.92
BEST1O76090 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
BEST1O76090 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.78■□□□□ 0.92
BEST1O76090 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
BEST1O76090 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.78■□□□□ 0.92
BEST1O76090 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BEST1O76090 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
BEST1O76090 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BEST1O76090 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.78■□□□□ 0.92
BEST1O76090 KRT16P5-201ENST00000455284 522 ntBASIC20.78■□□□□ 0.92
BEST1O76090 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.78■□□□□ 0.92
BEST1O76090 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.78■□□□□ 0.92
BEST1O76090 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
BEST1O76090 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
BEST1O76090 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BEST1O76090 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
BEST1O76090 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
BEST1O76090 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.78■□□□□ 0.92
BEST1O76090 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BEST1O76090 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BEST1O76090 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
BEST1O76090 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
BEST1O76090 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
BEST1O76090 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.77■□□□□ 0.92
BEST1O76090 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
BEST1O76090 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
BEST1O76090 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
BEST1O76090 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
BEST1O76090 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
BEST1O76090 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
BEST1O76090 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
BEST1O76090 RPS2P4-201ENST00000476944 856 ntBASIC20.77■□□□□ 0.92
BEST1O76090 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
BEST1O76090 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.77■□□□□ 0.92
BEST1O76090 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.77■□□□□ 0.92
BEST1O76090 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
BEST1O76090 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.77■□□□□ 0.92
BEST1O76090 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
BEST1O76090 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.77■□□□□ 0.92
BEST1O76090 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.77■□□□□ 0.92
BEST1O76090 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
BEST1O76090 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
BEST1O76090 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.77■□□□□ 0.91
BEST1O76090 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
BEST1O76090 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.77■□□□□ 0.91
BEST1O76090 PKD1P6-201ENST00000343738 4769 ntBASIC20.77■□□□□ 0.91
BEST1O76090 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
BEST1O76090 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
BEST1O76090 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
BEST1O76090 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.77■□□□□ 0.91
BEST1O76090 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
BEST1O76090 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
BEST1O76090 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
BEST1O76090 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.76■□□□□ 0.91
BEST1O76090 AP001271.2-201ENST00000624018 1556 ntBASIC20.76■□□□□ 0.91
BEST1O76090 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BEST1O76090 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.76■□□□□ 0.91
BEST1O76090 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
BEST1O76090 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
BEST1O76090 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BEST1O76090 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BEST1O76090 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
BEST1O76090 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
BEST1O76090 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.76■□□□□ 0.91
BEST1O76090 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms