Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.25■□□□□ 0.99
RNF40O75150 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
RNF40O75150 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.25■□□□□ 0.99
RNF40O75150 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.25■□□□□ 0.99
RNF40O75150 AP003097.1-201ENST00000530657 1135 ntBASIC21.25■□□□□ 0.99
RNF40O75150 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.25■□□□□ 0.99
RNF40O75150 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.25■□□□□ 0.99
RNF40O75150 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.25■□□□□ 0.99
RNF40O75150 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF40O75150 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF40O75150 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF40O75150 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF40O75150 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF40O75150 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
RNF40O75150 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF40O75150 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.24■□□□□ 0.99
RNF40O75150 TCF3P1-201ENST00000423021 1937 ntBASIC21.24■□□□□ 0.99
RNF40O75150 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF40O75150 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.24■□□□□ 0.99
RNF40O75150 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.24■□□□□ 0.99
RNF40O75150 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.24■□□□□ 0.99
RNF40O75150 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.24■□□□□ 0.99
RNF40O75150 AC073648.6-201ENST00000641589 218 ntBASIC21.24■□□□□ 0.99
RNF40O75150 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.24■□□□□ 0.99
RNF40O75150 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF40O75150 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.24■□□□□ 0.99
RNF40O75150 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
RNF40O75150 AL158211.5-201ENST00000623583 2518 ntBASIC21.23■□□□□ 0.99
RNF40O75150 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF40O75150 LETM1P2-201ENST00000597330 2178 ntBASIC21.23■□□□□ 0.99
RNF40O75150 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF40O75150 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF40O75150 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF40O75150 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF40O75150 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF40O75150 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF40O75150 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RNF40O75150 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RNF40O75150 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.23■□□□□ 0.99
RNF40O75150 AC091799.1-201ENST00000422823 811 ntBASIC21.23■□□□□ 0.99
RNF40O75150 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.23■□□□□ 0.99
RNF40O75150 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RNF40O75150 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
RNF40O75150 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
RNF40O75150 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF40O75150 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.23■□□□□ 0.99
RNF40O75150 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF40O75150 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.23■□□□□ 0.99
RNF40O75150 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RNF40O75150 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF40O75150 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF40O75150 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.22■□□□□ 0.99
RNF40O75150 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF40O75150 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF40O75150 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF40O75150 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF40O75150 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF40O75150 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
RNF40O75150 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
RNF40O75150 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.22■□□□□ 0.99
RNF40O75150 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF40O75150 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.22■□□□□ 0.99
RNF40O75150 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
RNF40O75150 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF40O75150 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF40O75150 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.22■□□□□ 0.99
RNF40O75150 FAM21FP-204ENST00000608637 956 ntBASIC21.22■□□□□ 0.99
RNF40O75150 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.22■□□□□ 0.99
RNF40O75150 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.22■□□□□ 0.99
RNF40O75150 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF40O75150 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF40O75150 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
RNF40O75150 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.22■□□□□ 0.99
RNF40O75150 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF40O75150 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF40O75150 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.22■□□□□ 0.99
RNF40O75150 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF40O75150 AC125437.2-201ENST00000625180 2167 ntBASIC21.21■□□□□ 0.99
RNF40O75150 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
RNF40O75150 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF40O75150 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RNF40O75150 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
RNF40O75150 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF40O75150 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RNF40O75150 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF40O75150 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
RNF40O75150 AL596275.1-201ENST00000423464 877 ntBASIC21.21■□□□□ 0.99
RNF40O75150 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
RNF40O75150 AC245052.3-201ENST00000450182 901 ntBASIC21.21■□□□□ 0.99
RNF40O75150 RPS2P4-201ENST00000476944 856 ntBASIC21.21■□□□□ 0.99
RNF40O75150 UNC93B4-201ENST00000505679 747 ntBASIC21.21■□□□□ 0.99
RNF40O75150 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.21■□□□□ 0.99
RNF40O75150 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF40O75150 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF40O75150 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.2■□□□□ 0.99
RNF40O75150 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
RNF40O75150 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF40O75150 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
RNF40O75150 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.2■□□□□ 0.98
RNF40O75150 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms