Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CXCL13O43927 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CXCL13O43927 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CXCL13O43927 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CXCL13O43927 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CXCL13O43927 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CXCL13O43927 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.71■□□□□ 0.43
CXCL13O43927 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.71■□□□□ 0.43
CXCL13O43927 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.71■□□□□ 0.43
CXCL13O43927 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.71■□□□□ 0.43
CXCL13O43927 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CXCL13O43927 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CXCL13O43927 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.71■□□□□ 0.43
CXCL13O43927 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CXCL13O43927 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CXCL13O43927 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.71■□□□□ 0.43
CXCL13O43927 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.71■□□□□ 0.43
CXCL13O43927 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.71■□□□□ 0.43
CXCL13O43927 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CXCL13O43927 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CXCL13O43927 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CXCL13O43927 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.71■□□□□ 0.43
CXCL13O43927 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CXCL13O43927 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CXCL13O43927 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CXCL13O43927 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.71■□□□□ 0.43
CXCL13O43927 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
CXCL13O43927 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CXCL13O43927 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CXCL13O43927 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CXCL13O43927 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CXCL13O43927 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CXCL13O43927 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CXCL13O43927 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.7■□□□□ 0.42
CXCL13O43927 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.7■□□□□ 0.42
CXCL13O43927 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CXCL13O43927 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CXCL13O43927 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CXCL13O43927 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.7■□□□□ 0.42
CXCL13O43927 AC133681.1-201ENST00000465482 601 ntBASIC17.7■□□□□ 0.42
CXCL13O43927 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
CXCL13O43927 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CXCL13O43927 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.7■□□□□ 0.42
CXCL13O43927 AC110285.5-201ENST00000611501 352 ntBASIC17.7■□□□□ 0.42
CXCL13O43927 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
CXCL13O43927 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CXCL13O43927 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CXCL13O43927 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.7■□□□□ 0.42
CXCL13O43927 AC112907.3-201ENST00000577781 2400 ntBASIC17.7■□□□□ 0.42
CXCL13O43927 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CXCL13O43927 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CXCL13O43927 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CXCL13O43927 TFP1-202ENST00000475455 1573 ntBASIC17.7■□□□□ 0.42
CXCL13O43927 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
CXCL13O43927 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CXCL13O43927 NBPF21P-201ENST00000425093 1451 ntBASIC17.69■□□□□ 0.42
CXCL13O43927 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.69■□□□□ 0.42
CXCL13O43927 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.69■□□□□ 0.42
CXCL13O43927 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.69■□□□□ 0.42
CXCL13O43927 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CXCL13O43927 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.69■□□□□ 0.42
CXCL13O43927 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXCL13O43927 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CXCL13O43927 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CXCL13O43927 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CXCL13O43927 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CXCL13O43927 UBE2SP1-201ENST00000450587 669 ntBASIC17.69■□□□□ 0.42
CXCL13O43927 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXCL13O43927 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.69■□□□□ 0.42
CXCL13O43927 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.69■□□□□ 0.42
CXCL13O43927 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.69■□□□□ 0.42
CXCL13O43927 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.69■□□□□ 0.42
CXCL13O43927 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.69■□□□□ 0.42
CXCL13O43927 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.69■□□□□ 0.42
CXCL13O43927 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.69■□□□□ 0.42
CXCL13O43927 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.69■□□□□ 0.42
CXCL13O43927 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.69■□□□□ 0.42
CXCL13O43927 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXCL13O43927 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXCL13O43927 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CXCL13O43927 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.69■□□□□ 0.42
CXCL13O43927 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXCL13O43927 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.69■□□□□ 0.42
CXCL13O43927 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
CXCL13O43927 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.68■□□□□ 0.42
CXCL13O43927 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXCL13O43927 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXCL13O43927 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXCL13O43927 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CXCL13O43927 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXCL13O43927 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXCL13O43927 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXCL13O43927 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CXCL13O43927 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
CXCL13O43927 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXCL13O43927 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.68■□□□□ 0.42
CXCL13O43927 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CXCL13O43927 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.68■□□□□ 0.42
CXCL13O43927 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.68■□□□□ 0.42
CXCL13O43927 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms