Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.75■□□□□ 0.59
PROM1O43490 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.75■□□□□ 0.59
PROM1O43490 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.75■□□□□ 0.59
PROM1O43490 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PROM1O43490 AC009237.14-201ENST00000609975 1594 ntBASIC18.75■□□□□ 0.59
PROM1O43490 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PROM1O43490 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PROM1O43490 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.74■□□□□ 0.59
PROM1O43490 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.74■□□□□ 0.59
PROM1O43490 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
PROM1O43490 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PROM1O43490 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PROM1O43490 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.74■□□□□ 0.59
PROM1O43490 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PROM1O43490 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PROM1O43490 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
PROM1O43490 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
PROM1O43490 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PROM1O43490 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PROM1O43490 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.74■□□□□ 0.59
PROM1O43490 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PROM1O43490 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.74■□□□□ 0.59
PROM1O43490 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.74■□□□□ 0.59
PROM1O43490 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PROM1O43490 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PROM1O43490 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PROM1O43490 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.74■□□□□ 0.59
PROM1O43490 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.74■□□□□ 0.59
PROM1O43490 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PROM1O43490 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PROM1O43490 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.74■□□□□ 0.59
PROM1O43490 AFG3L1P-217ENST00000557444 2447 ntBASIC18.74■□□□□ 0.59
PROM1O43490 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.74■□□□□ 0.59
PROM1O43490 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PROM1O43490 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PROM1O43490 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PROM1O43490 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PROM1O43490 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PROM1O43490 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.73■□□□□ 0.59
PROM1O43490 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PROM1O43490 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PROM1O43490 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PROM1O43490 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.73■□□□□ 0.59
PROM1O43490 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PROM1O43490 AP001271.2-201ENST00000624018 1556 ntBASIC18.73■□□□□ 0.59
PROM1O43490 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PROM1O43490 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PROM1O43490 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PROM1O43490 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
PROM1O43490 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PROM1O43490 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PROM1O43490 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PROM1O43490 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PROM1O43490 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.73■□□□□ 0.59
PROM1O43490 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.73■□□□□ 0.59
PROM1O43490 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.73■□□□□ 0.59
PROM1O43490 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.73■□□□□ 0.59
PROM1O43490 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.73■□□□□ 0.59
PROM1O43490 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.73■□□□□ 0.59
PROM1O43490 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.73■□□□□ 0.59
PROM1O43490 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PROM1O43490 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PROM1O43490 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PROM1O43490 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PROM1O43490 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PROM1O43490 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PROM1O43490 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.73■□□□□ 0.59
PROM1O43490 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PROM1O43490 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PROM1O43490 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.72■□□□□ 0.59
PROM1O43490 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PROM1O43490 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
PROM1O43490 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PROM1O43490 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.72■□□□□ 0.59
PROM1O43490 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.72■□□□□ 0.59
PROM1O43490 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.72■□□□□ 0.59
PROM1O43490 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.72■□□□□ 0.59
PROM1O43490 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PROM1O43490 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PROM1O43490 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PROM1O43490 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PROM1O43490 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.72■□□□□ 0.59
PROM1O43490 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PROM1O43490 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PROM1O43490 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PROM1O43490 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.72■□□□□ 0.59
PROM1O43490 UNC93B5-201ENST00000530315 699 ntBASIC18.72■□□□□ 0.59
PROM1O43490 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PROM1O43490 KRT18P6-201ENST00000555540 1265 ntBASIC18.72■□□□□ 0.59
PROM1O43490 SOX15-203ENST00000570788 1093 ntBASIC18.72■□□□□ 0.59
PROM1O43490 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.72■□□□□ 0.59
PROM1O43490 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PROM1O43490 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
PROM1O43490 AC120498.8-201ENST00000614275 531 ntBASIC18.72■□□□□ 0.59
PROM1O43490 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.72■□□□□ 0.59
PROM1O43490 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PROM1O43490 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PROM1O43490 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.72■□□□□ 0.59
PROM1O43490 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PROM1O43490 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms