Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HOXA2O43364 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.2■□□□□ 0.99
HOXA2O43364 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.2■□□□□ 0.98
HOXA2O43364 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HOXA2O43364 TSPY14P-201ENST00000303979 915 ntBASIC21.2■□□□□ 0.98
HOXA2O43364 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
HOXA2O43364 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HOXA2O43364 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.2■□□□□ 0.98
HOXA2O43364 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
HOXA2O43364 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
HOXA2O43364 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HOXA2O43364 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.2■□□□□ 0.98
HOXA2O43364 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HOXA2O43364 AC073508.3-201ENST00000619697 1419 ntBASIC21.2■□□□□ 0.98
HOXA2O43364 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HOXA2O43364 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.2■□□□□ 0.98
HOXA2O43364 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HOXA2O43364 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
HOXA2O43364 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.19■□□□□ 0.98
HOXA2O43364 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HOXA2O43364 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HOXA2O43364 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
HOXA2O43364 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.19■□□□□ 0.98
HOXA2O43364 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.19■□□□□ 0.98
HOXA2O43364 LIN28AP1-201ENST00000429574 405 ntBASIC21.19■□□□□ 0.98
HOXA2O43364 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.19■□□□□ 0.98
HOXA2O43364 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
HOXA2O43364 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HOXA2O43364 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HOXA2O43364 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HOXA2O43364 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.19■□□□□ 0.98
HOXA2O43364 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
HOXA2O43364 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.19■□□□□ 0.98
HOXA2O43364 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
HOXA2O43364 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
HOXA2O43364 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HOXA2O43364 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HOXA2O43364 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HOXA2O43364 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HOXA2O43364 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HOXA2O43364 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HOXA2O43364 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HOXA2O43364 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.18■□□□□ 0.98
HOXA2O43364 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
HOXA2O43364 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
HOXA2O43364 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HOXA2O43364 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
HOXA2O43364 CRYGFP-201ENST00000418459 633 ntBASIC21.18■□□□□ 0.98
HOXA2O43364 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
HOXA2O43364 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HOXA2O43364 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.18■□□□□ 0.98
HOXA2O43364 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.18■□□□□ 0.98
HOXA2O43364 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
HOXA2O43364 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HOXA2O43364 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
HOXA2O43364 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
HOXA2O43364 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.17■□□□□ 0.98
HOXA2O43364 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HOXA2O43364 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.17■□□□□ 0.98
HOXA2O43364 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HOXA2O43364 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HOXA2O43364 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.17■□□□□ 0.98
HOXA2O43364 ATP5G1P1-201ENST00000448724 379 ntBASIC21.17■□□□□ 0.98
HOXA2O43364 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.17■□□□□ 0.98
HOXA2O43364 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC21.17■□□□□ 0.98
HOXA2O43364 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.17■□□□□ 0.98
HOXA2O43364 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21.17■□□□□ 0.98
HOXA2O43364 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.17■□□□□ 0.98
HOXA2O43364 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
HOXA2O43364 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.17■□□□□ 0.98
HOXA2O43364 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.17■□□□□ 0.98
HOXA2O43364 AP000692.2-201ENST00000608391 879 ntBASIC21.17■□□□□ 0.98
HOXA2O43364 AC130371.2-201ENST00000619443 611 ntBASIC21.17■□□□□ 0.98
HOXA2O43364 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HOXA2O43364 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.17■□□□□ 0.98
HOXA2O43364 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HOXA2O43364 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
HOXA2O43364 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
HOXA2O43364 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HOXA2O43364 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HOXA2O43364 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HOXA2O43364 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
HOXA2O43364 AC026310.3-201ENST00000625186 2373 ntBASIC21.16■□□□□ 0.98
HOXA2O43364 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HOXA2O43364 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HOXA2O43364 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
HOXA2O43364 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HOXA2O43364 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.16■□□□□ 0.98
HOXA2O43364 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HOXA2O43364 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.16■□□□□ 0.98
HOXA2O43364 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.16■□□□□ 0.98
HOXA2O43364 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.16■□□□□ 0.98
HOXA2O43364 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HOXA2O43364 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
HOXA2O43364 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.16■□□□□ 0.98
HOXA2O43364 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HOXA2O43364 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.16■□□□□ 0.98
HOXA2O43364 HLA-A-209ENST00000638375 975 ntBASIC21.16■□□□□ 0.98
HOXA2O43364 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
HOXA2O43364 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms