Protein–RNA interactions for Protein: O15554

KCNN4, Intermediate conductance calcium-activated potassium channel protein 4, humanhuman

Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNN4O15554 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNN4O15554 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
KCNN4O15554 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNN4O15554 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.3■□□□□ 0.84
KCNN4O15554 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNN4O15554 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.3■□□□□ 0.84
KCNN4O15554 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNN4O15554 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNN4O15554 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
KCNN4O15554 MIPEPP3-201ENST00000412105 444 ntBASIC20.3■□□□□ 0.84
KCNN4O15554 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.3■□□□□ 0.84
KCNN4O15554 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.3■□□□□ 0.84
KCNN4O15554 AC083906.2-201ENST00000511578 360 ntBASIC20.3■□□□□ 0.84
KCNN4O15554 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
KCNN4O15554 AL121832.2-201ENST00000610979 668 ntBASIC20.3■□□□□ 0.84
KCNN4O15554 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNN4O15554 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNN4O15554 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.3■□□□□ 0.84
KCNN4O15554 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNN4O15554 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KCNN4O15554 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNN4O15554 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.3■□□□□ 0.84
KCNN4O15554 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNN4O15554 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNN4O15554 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
KCNN4O15554 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.29■□□□□ 0.84
KCNN4O15554 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNN4O15554 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNN4O15554 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNN4O15554 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNN4O15554 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNN4O15554 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNN4O15554 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNN4O15554 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNN4O15554 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNN4O15554 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
KCNN4O15554 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.29■□□□□ 0.84
KCNN4O15554 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.29■□□□□ 0.84
KCNN4O15554 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNN4O15554 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KCNN4O15554 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KCNN4O15554 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.29■□□□□ 0.84
KCNN4O15554 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.29■□□□□ 0.84
KCNN4O15554 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KCNN4O15554 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.29■□□□□ 0.84
KCNN4O15554 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNN4O15554 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KCNN4O15554 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
KCNN4O15554 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KCNN4O15554 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KCNN4O15554 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KCNN4O15554 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KCNN4O15554 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
KCNN4O15554 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KCNN4O15554 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.28■□□□□ 0.84
KCNN4O15554 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.28■□□□□ 0.84
KCNN4O15554 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
KCNN4O15554 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.28■□□□□ 0.84
KCNN4O15554 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
KCNN4O15554 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
KCNN4O15554 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KCNN4O15554 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.28■□□□□ 0.84
KCNN4O15554 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
KCNN4O15554 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KCNN4O15554 AC093484.2-201ENST00000580996 2166 ntBASIC20.28■□□□□ 0.84
KCNN4O15554 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KCNN4O15554 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KCNN4O15554 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KCNN4O15554 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KCNN4O15554 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.27■□□□□ 0.84
KCNN4O15554 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.27■□□□□ 0.84
KCNN4O15554 AIRN-201ENST00000601203 4374 ntBASIC20.27■□□□□ 0.84
KCNN4O15554 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.27■□□□□ 0.84
KCNN4O15554 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.27■□□□□ 0.84
KCNN4O15554 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KCNN4O15554 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
KCNN4O15554 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.27■□□□□ 0.84
KCNN4O15554 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.27■□□□□ 0.84
KCNN4O15554 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.27■□□□□ 0.84
KCNN4O15554 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.27■□□□□ 0.84
KCNN4O15554 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.27■□□□□ 0.84
KCNN4O15554 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
KCNN4O15554 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
KCNN4O15554 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KCNN4O15554 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.27■□□□□ 0.84
KCNN4O15554 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
KCNN4O15554 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
KCNN4O15554 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
KCNN4O15554 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
KCNN4O15554 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.83
KCNN4O15554 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
KCNN4O15554 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
KCNN4O15554 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
KCNN4O15554 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KCNN4O15554 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KCNN4O15554 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KCNN4O15554 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
KCNN4O15554 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.26■□□□□ 0.83
KCNN4O15554 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.26■□□□□ 0.83
KCNN4O15554 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms