Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AL031985.4-201ENST00000642138 673 ntBASIC22.68■■□□□ 1.22
ATP2A1O14983 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
ATP2A1O14983 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC22.68■■□□□ 1.22
ATP2A1O14983 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
ATP2A1O14983 PHGDH-210ENST00000641115 1638 ntBASIC22.68■■□□□ 1.22
ATP2A1O14983 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ATP2A1O14983 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
ATP2A1O14983 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
ATP2A1O14983 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
ATP2A1O14983 KRT8P9-201ENST00000558927 1449 ntBASIC22.67■■□□□ 1.22
ATP2A1O14983 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ATP2A1O14983 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
ATP2A1O14983 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
ATP2A1O14983 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC22.67■■□□□ 1.22
ATP2A1O14983 TK2-213ENST00000563369 882 ntTSL 5 BASIC22.67■■□□□ 1.22
ATP2A1O14983 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
ATP2A1O14983 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
ATP2A1O14983 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
ATP2A1O14983 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC22.67■■□□□ 1.22
ATP2A1O14983 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ATP2A1O14983 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
ATP2A1O14983 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC22.66■■□□□ 1.22
ATP2A1O14983 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
ATP2A1O14983 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ATP2A1O14983 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
ATP2A1O14983 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ATP2A1O14983 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC22.66■■□□□ 1.22
ATP2A1O14983 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
ATP2A1O14983 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC22.66■■□□□ 1.22
ATP2A1O14983 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ATP2A1O14983 MESTP1-201ENST00000404287 994 ntBASIC22.66■■□□□ 1.22
ATP2A1O14983 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC22.66■■□□□ 1.22
ATP2A1O14983 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC22.66■■□□□ 1.22
ATP2A1O14983 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC22.66■■□□□ 1.22
ATP2A1O14983 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC22.66■■□□□ 1.22
ATP2A1O14983 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC22.66■■□□□ 1.22
ATP2A1O14983 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC22.66■■□□□ 1.22
ATP2A1O14983 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
ATP2A1O14983 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
ATP2A1O14983 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
ATP2A1O14983 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
ATP2A1O14983 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
ATP2A1O14983 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
ATP2A1O14983 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC22.65■■□□□ 1.22
ATP2A1O14983 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
ATP2A1O14983 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
ATP2A1O14983 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
ATP2A1O14983 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
ATP2A1O14983 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC22.65■■□□□ 1.22
ATP2A1O14983 GOLGA6L3-201ENST00000507199 1679 ntBASIC22.65■■□□□ 1.22
ATP2A1O14983 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC22.65■■□□□ 1.22
ATP2A1O14983 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
ATP2A1O14983 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC22.65■■□□□ 1.22
ATP2A1O14983 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
ATP2A1O14983 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
ATP2A1O14983 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC22.64■■□□□ 1.22
ATP2A1O14983 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.22
ATP2A1O14983 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC22.64■■□□□ 1.22
ATP2A1O14983 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC22.64■■□□□ 1.22
ATP2A1O14983 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
ATP2A1O14983 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC22.64■■□□□ 1.22
ATP2A1O14983 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC22.64■■□□□ 1.21
ATP2A1O14983 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
ATP2A1O14983 MIR1238-201ENST00000408483 83 ntBASIC22.64■■□□□ 1.21
ATP2A1O14983 TUBB8P6-201ENST00000436895 1288 ntBASIC22.64■■□□□ 1.21
ATP2A1O14983 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
ATP2A1O14983 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ATP2A1O14983 ABBA01031674.1-201ENST00000635145 728 ntBASIC22.64■■□□□ 1.21
ATP2A1O14983 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ATP2A1O14983 FSCN1P1-201ENST00000568912 1481 ntBASIC22.64■■□□□ 1.21
ATP2A1O14983 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.21
ATP2A1O14983 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
ATP2A1O14983 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
ATP2A1O14983 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ATP2A1O14983 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
ATP2A1O14983 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
ATP2A1O14983 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ATP2A1O14983 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ATP2A1O14983 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ATP2A1O14983 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ATP2A1O14983 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ATP2A1O14983 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ATP2A1O14983 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ATP2A1O14983 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
ATP2A1O14983 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
ATP2A1O14983 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ATP2A1O14983 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
ATP2A1O14983 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC22.63■■□□□ 1.21
ATP2A1O14983 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC22.63■■□□□ 1.21
ATP2A1O14983 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC22.63■■□□□ 1.21
ATP2A1O14983 MIR6786-201ENST00000616843 113 ntBASIC22.63■■□□□ 1.21
ATP2A1O14983 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ATP2A1O14983 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.63■■□□□ 1.21
ATP2A1O14983 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
ATP2A1O14983 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC22.63■■□□□ 1.21
ATP2A1O14983 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
ATP2A1O14983 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
ATP2A1O14983 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
ATP2A1O14983 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
ATP2A1O14983 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms