Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.97■□□□□ 0.79
AP3B1O00203 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
AP3B1O00203 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
AP3B1O00203 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.97■□□□□ 0.79
AP3B1O00203 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.97■□□□□ 0.79
AP3B1O00203 CROCCP5-201ENST00000436658 830 ntBASIC19.97■□□□□ 0.79
AP3B1O00203 AC006970.2-201ENST00000450065 779 ntBASIC19.97■□□□□ 0.79
AP3B1O00203 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.97■□□□□ 0.79
AP3B1O00203 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.97■□□□□ 0.79
AP3B1O00203 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.97■□□□□ 0.79
AP3B1O00203 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.97■□□□□ 0.79
AP3B1O00203 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
AP3B1O00203 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
AP3B1O00203 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
AP3B1O00203 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
AP3B1O00203 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP3B1O00203 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
AP3B1O00203 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP3B1O00203 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP3B1O00203 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.96■□□□□ 0.79
AP3B1O00203 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP3B1O00203 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
AP3B1O00203 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
AP3B1O00203 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.96■□□□□ 0.79
AP3B1O00203 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP3B1O00203 MIPEPP3-201ENST00000412105 444 ntBASIC19.96■□□□□ 0.79
AP3B1O00203 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.96■□□□□ 0.79
AP3B1O00203 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.96■□□□□ 0.79
AP3B1O00203 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.96■□□□□ 0.79
AP3B1O00203 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.96■□□□□ 0.79
AP3B1O00203 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
AP3B1O00203 AC092118.2-201ENST00000613495 667 ntBASIC19.96■□□□□ 0.79
AP3B1O00203 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP3B1O00203 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.96■□□□□ 0.79
AP3B1O00203 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.96■□□□□ 0.79
AP3B1O00203 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP3B1O00203 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP3B1O00203 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
AP3B1O00203 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP3B1O00203 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP3B1O00203 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.95■□□□□ 0.78
AP3B1O00203 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP3B1O00203 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
AP3B1O00203 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP3B1O00203 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP3B1O00203 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.95■□□□□ 0.78
AP3B1O00203 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
AP3B1O00203 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
AP3B1O00203 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.95■□□□□ 0.78
AP3B1O00203 AC083906.2-201ENST00000511578 360 ntBASIC19.95■□□□□ 0.78
AP3B1O00203 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP3B1O00203 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
AP3B1O00203 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.95■□□□□ 0.78
AP3B1O00203 AC005829.2-201ENST00000571422 1056 ntBASIC19.95■□□□□ 0.78
AP3B1O00203 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
AP3B1O00203 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP3B1O00203 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
AP3B1O00203 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
AP3B1O00203 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP3B1O00203 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP3B1O00203 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
AP3B1O00203 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
AP3B1O00203 AC116351.2-201ENST00000606540 1585 ntBASIC19.95■□□□□ 0.78
AP3B1O00203 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP3B1O00203 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP3B1O00203 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
AP3B1O00203 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
AP3B1O00203 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP3B1O00203 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.94■□□□□ 0.78
AP3B1O00203 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP3B1O00203 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.94■□□□□ 0.78
AP3B1O00203 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP3B1O00203 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP3B1O00203 SLC29A4P1-201ENST00000398760 971 ntBASIC19.94■□□□□ 0.78
AP3B1O00203 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.94■□□□□ 0.78
AP3B1O00203 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
AP3B1O00203 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.94■□□□□ 0.78
AP3B1O00203 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.94■□□□□ 0.78
AP3B1O00203 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP3B1O00203 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP3B1O00203 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP3B1O00203 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP3B1O00203 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.94■□□□□ 0.78
AP3B1O00203 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP3B1O00203 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
AP3B1O00203 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
AP3B1O00203 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.94■□□□□ 0.78
AP3B1O00203 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP3B1O00203 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.94■□□□□ 0.78
AP3B1O00203 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.94■□□□□ 0.78
AP3B1O00203 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
AP3B1O00203 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.93■□□□□ 0.78
AP3B1O00203 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
AP3B1O00203 AC007952.6-201ENST00000573168 2673 ntBASIC19.93■□□□□ 0.78
AP3B1O00203 AC003957.1-201ENST00000625108 2673 ntBASIC19.93■□□□□ 0.78
AP3B1O00203 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
AP3B1O00203 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
AP3B1O00203 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.93■□□□□ 0.78
AP3B1O00203 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.93■□□□□ 0.78
AP3B1O00203 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms