Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
DDX39AO00148 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
DDX39AO00148 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
DDX39AO00148 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
DDX39AO00148 AL162377.1-201ENST00000618844 1793 ntBASIC22.25■■□□□ 1.15
DDX39AO00148 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
DDX39AO00148 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DDX39AO00148 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
DDX39AO00148 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DDX39AO00148 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DDX39AO00148 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC22.25■■□□□ 1.15
DDX39AO00148 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
DDX39AO00148 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
DDX39AO00148 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC22.25■■□□□ 1.15
DDX39AO00148 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC22.25■■□□□ 1.15
DDX39AO00148 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC22.25■■□□□ 1.15
DDX39AO00148 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC22.25■■□□□ 1.15
DDX39AO00148 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
DDX39AO00148 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DDX39AO00148 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
DDX39AO00148 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DDX39AO00148 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
DDX39AO00148 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
DDX39AO00148 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
DDX39AO00148 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
DDX39AO00148 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
DDX39AO00148 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
DDX39AO00148 TFP1-202ENST00000475455 1573 ntBASIC22.25■■□□□ 1.15
DDX39AO00148 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
DDX39AO00148 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
DDX39AO00148 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC22.24■■□□□ 1.15
DDX39AO00148 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
DDX39AO00148 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC22.24■■□□□ 1.15
DDX39AO00148 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
DDX39AO00148 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
DDX39AO00148 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
DDX39AO00148 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
DDX39AO00148 KRT16P5-201ENST00000455284 522 ntBASIC22.24■■□□□ 1.15
DDX39AO00148 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
DDX39AO00148 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC22.24■■□□□ 1.15
DDX39AO00148 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
DDX39AO00148 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC22.24■■□□□ 1.15
DDX39AO00148 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
DDX39AO00148 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
DDX39AO00148 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
DDX39AO00148 AP006587.1-201ENST00000534129 1502 ntBASIC22.24■■□□□ 1.15
DDX39AO00148 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC22.24■■□□□ 1.15
DDX39AO00148 HTR7P1-201ENST00000538670 1336 ntBASIC22.24■■□□□ 1.15
DDX39AO00148 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
DDX39AO00148 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
DDX39AO00148 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC22.24■■□□□ 1.15
DDX39AO00148 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
DDX39AO00148 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
DDX39AO00148 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC22.24■■□□□ 1.15
DDX39AO00148 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC22.24■■□□□ 1.15
DDX39AO00148 AC112907.3-201ENST00000577781 2400 ntBASIC22.23■■□□□ 1.15
DDX39AO00148 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX39AO00148 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX39AO00148 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX39AO00148 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
DDX39AO00148 AL691432.2-201ENST00000607222 2038 ntBASIC22.23■■□□□ 1.15
DDX39AO00148 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX39AO00148 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
DDX39AO00148 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC22.23■■□□□ 1.15
DDX39AO00148 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
DDX39AO00148 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX39AO00148 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
DDX39AO00148 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC22.23■■□□□ 1.15
DDX39AO00148 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC22.23■■□□□ 1.15
DDX39AO00148 AC233702.5-201ENST00000584107 538 ntBASIC22.23■■□□□ 1.15
DDX39AO00148 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
DDX39AO00148 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX39AO00148 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX39AO00148 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
DDX39AO00148 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX39AO00148 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC22.23■■□□□ 1.15
DDX39AO00148 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC22.23■■□□□ 1.15
DDX39AO00148 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
DDX39AO00148 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
DDX39AO00148 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC22.22■■□□□ 1.15
DDX39AO00148 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC22.22■■□□□ 1.15
DDX39AO00148 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DDX39AO00148 AC099778.1-201ENST00000568593 1911 ntBASIC22.22■■□□□ 1.15
DDX39AO00148 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
DDX39AO00148 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC22.22■■□□□ 1.15
DDX39AO00148 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DDX39AO00148 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DDX39AO00148 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
DDX39AO00148 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
DDX39AO00148 TSPY7P-201ENST00000431358 1114 ntBASIC22.22■■□□□ 1.15
DDX39AO00148 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC22.22■■□□□ 1.15
DDX39AO00148 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
DDX39AO00148 AC004264.1-201ENST00000608354 794 ntBASIC22.22■■□□□ 1.15
DDX39AO00148 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DDX39AO00148 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC22.22■■□□□ 1.15
DDX39AO00148 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DDX39AO00148 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
DDX39AO00148 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC22.22■■□□□ 1.15
DDX39AO00148 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC22.21■■□□□ 1.15
DDX39AO00148 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms