Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NACAE9PAV3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
NACAE9PAV3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NACAE9PAV3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NACAE9PAV3 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
NACAE9PAV3 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC14.4□□□□□ -0.1
NACAE9PAV3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NACAE9PAV3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NACAE9PAV3 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NACAE9PAV3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NACAE9PAV3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NACAE9PAV3 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NACAE9PAV3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC14.4□□□□□ -0.1
NACAE9PAV3 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC14.4□□□□□ -0.1
NACAE9PAV3 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
NACAE9PAV3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NACAE9PAV3 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NACAE9PAV3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NACAE9PAV3 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC14.4□□□□□ -0.1
NACAE9PAV3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC14.4□□□□□ -0.1
NACAE9PAV3 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC14.4□□□□□ -0.1
NACAE9PAV3 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NACAE9PAV3 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NACAE9PAV3 AL158211.5-201ENST00000623583 2518 ntBASIC14.4□□□□□ -0.1
NACAE9PAV3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NACAE9PAV3 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NACAE9PAV3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
NACAE9PAV3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
NACAE9PAV3 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NACAE9PAV3 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC14.39□□□□□ -0.11
NACAE9PAV3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
NACAE9PAV3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NACAE9PAV3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NACAE9PAV3 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
NACAE9PAV3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NACAE9PAV3 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NACAE9PAV3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NACAE9PAV3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NACAE9PAV3 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NACAE9PAV3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
NACAE9PAV3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
NACAE9PAV3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NACAE9PAV3 DPP3P2-201ENST00000416030 1696 ntBASIC14.39□□□□□ -0.11
NACAE9PAV3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC14.39□□□□□ -0.11
NACAE9PAV3 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NACAE9PAV3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NACAE9PAV3 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NACAE9PAV3 PGM5P4-201ENST00000421970 445 ntBASIC14.39□□□□□ -0.11
NACAE9PAV3 TERF1P5-201ENST00000477545 1207 ntBASIC14.39□□□□□ -0.11
NACAE9PAV3 CD99P1-205ENST00000527459 561 ntBASIC14.39□□□□□ -0.11
NACAE9PAV3 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC14.39□□□□□ -0.11
NACAE9PAV3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC14.39□□□□□ -0.11
NACAE9PAV3 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
NACAE9PAV3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NACAE9PAV3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC14.39□□□□□ -0.11
NACAE9PAV3 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NACAE9PAV3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC14.39□□□□□ -0.11
NACAE9PAV3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC14.39□□□□□ -0.11
NACAE9PAV3 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NACAE9PAV3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NACAE9PAV3 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.39□□□□□ -0.11
NACAE9PAV3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
NACAE9PAV3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NACAE9PAV3 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NACAE9PAV3 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NACAE9PAV3 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
NACAE9PAV3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NACAE9PAV3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NACAE9PAV3 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NACAE9PAV3 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
NACAE9PAV3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC14.38□□□□□ -0.11
NACAE9PAV3 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC14.38□□□□□ -0.11
NACAE9PAV3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC14.38□□□□□ -0.11
NACAE9PAV3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NACAE9PAV3 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NACAE9PAV3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NACAE9PAV3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC14.38□□□□□ -0.11
NACAE9PAV3 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NACAE9PAV3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NACAE9PAV3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NACAE9PAV3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NACAE9PAV3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
NACAE9PAV3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NACAE9PAV3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NACAE9PAV3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC14.38□□□□□ -0.11
NACAE9PAV3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
NACAE9PAV3 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NACAE9PAV3 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
NACAE9PAV3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NACAE9PAV3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NACAE9PAV3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NACAE9PAV3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NACAE9PAV3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC14.38□□□□□ -0.11
NACAE9PAV3 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
NACAE9PAV3 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NACAE9PAV3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC14.38□□□□□ -0.11
NACAE9PAV3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC14.38□□□□□ -0.11
NACAE9PAV3 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NACAE9PAV3 TBCB-214ENST00000629269 413 ntTSL 5 BASIC14.38□□□□□ -0.11
NACAE9PAV3 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms