Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RCCD1A6NED2 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
RCCD1A6NED2 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
RCCD1A6NED2 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RCCD1A6NED2 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.02■□□□□ 0.96
RCCD1A6NED2 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.02■□□□□ 0.96
RCCD1A6NED2 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RCCD1A6NED2 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
RCCD1A6NED2 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.02■□□□□ 0.96
RCCD1A6NED2 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RCCD1A6NED2 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.02■□□□□ 0.95
RCCD1A6NED2 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
RCCD1A6NED2 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RCCD1A6NED2 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RCCD1A6NED2 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
RCCD1A6NED2 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
RCCD1A6NED2 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RCCD1A6NED2 PHGDH-210ENST00000641115 1638 ntBASIC21.01■□□□□ 0.95
RCCD1A6NED2 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RCCD1A6NED2 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.01■□□□□ 0.95
RCCD1A6NED2 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
RCCD1A6NED2 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
RCCD1A6NED2 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.01■□□□□ 0.95
RCCD1A6NED2 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.01■□□□□ 0.95
RCCD1A6NED2 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RCCD1A6NED2 KRT18P68-201ENST00000392293 1000 ntBASIC21.01■□□□□ 0.95
RCCD1A6NED2 AL355472.2-201ENST00000422958 438 ntBASIC21.01■□□□□ 0.95
RCCD1A6NED2 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
RCCD1A6NED2 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.01■□□□□ 0.95
RCCD1A6NED2 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RCCD1A6NED2 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.01■□□□□ 0.95
RCCD1A6NED2 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RCCD1A6NED2 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.01■□□□□ 0.95
RCCD1A6NED2 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RCCD1A6NED2 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RCCD1A6NED2 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.01■□□□□ 0.95
RCCD1A6NED2 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RCCD1A6NED2 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21■□□□□ 0.95
RCCD1A6NED2 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RCCD1A6NED2 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RCCD1A6NED2 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
RCCD1A6NED2 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC21■□□□□ 0.95
RCCD1A6NED2 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RCCD1A6NED2 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC21■□□□□ 0.95
RCCD1A6NED2 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
RCCD1A6NED2 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RCCD1A6NED2 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21■□□□□ 0.95
RCCD1A6NED2 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21■□□□□ 0.95
RCCD1A6NED2 DUX4L16-201ENST00000555130 1264 ntBASIC21■□□□□ 0.95
RCCD1A6NED2 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21■□□□□ 0.95
RCCD1A6NED2 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21■□□□□ 0.95
RCCD1A6NED2 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21■□□□□ 0.95
RCCD1A6NED2 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RCCD1A6NED2 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
RCCD1A6NED2 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RCCD1A6NED2 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC21■□□□□ 0.95
RCCD1A6NED2 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
RCCD1A6NED2 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RCCD1A6NED2 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RCCD1A6NED2 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
RCCD1A6NED2 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RCCD1A6NED2 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RCCD1A6NED2 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RCCD1A6NED2 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RCCD1A6NED2 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RCCD1A6NED2 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RCCD1A6NED2 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RCCD1A6NED2 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RCCD1A6NED2 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RCCD1A6NED2 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RCCD1A6NED2 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RCCD1A6NED2 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
RCCD1A6NED2 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RCCD1A6NED2 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
RCCD1A6NED2 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RCCD1A6NED2 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RCCD1A6NED2 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.99■□□□□ 0.95
RCCD1A6NED2 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
RCCD1A6NED2 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.99■□□□□ 0.95
RCCD1A6NED2 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.99■□□□□ 0.95
RCCD1A6NED2 AC011767.1-201ENST00000617410 1153 ntBASIC20.99■□□□□ 0.95
RCCD1A6NED2 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
RCCD1A6NED2 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RCCD1A6NED2 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RCCD1A6NED2 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RCCD1A6NED2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RCCD1A6NED2 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RCCD1A6NED2 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RCCD1A6NED2 CROCCP3-202ENST00000420820 1947 ntBASIC20.98■□□□□ 0.95
RCCD1A6NED2 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RCCD1A6NED2 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.98■□□□□ 0.95
RCCD1A6NED2 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
RCCD1A6NED2 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.98■□□□□ 0.95
RCCD1A6NED2 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RCCD1A6NED2 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RCCD1A6NED2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RCCD1A6NED2 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.98■□□□□ 0.95
RCCD1A6NED2 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
RCCD1A6NED2 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RCCD1A6NED2 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms