Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC16.92■□□□□ 0.3
MEIS3P1A6NDR6 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
MEIS3P1A6NDR6 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MEIS3P1A6NDR6 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MEIS3P1A6NDR6 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.92■□□□□ 0.3
MEIS3P1A6NDR6 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
MEIS3P1A6NDR6 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MEIS3P1A6NDR6 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.92■□□□□ 0.3
MEIS3P1A6NDR6 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
MEIS3P1A6NDR6 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
MEIS3P1A6NDR6 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MEIS3P1A6NDR6 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
MEIS3P1A6NDR6 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
MEIS3P1A6NDR6 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MEIS3P1A6NDR6 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MEIS3P1A6NDR6 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MEIS3P1A6NDR6 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC16.91■□□□□ 0.3
MEIS3P1A6NDR6 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
MEIS3P1A6NDR6 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
MEIS3P1A6NDR6 AC007322.3-201ENST00000426526 701 ntBASIC16.91■□□□□ 0.3
MEIS3P1A6NDR6 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.91■□□□□ 0.3
MEIS3P1A6NDR6 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC16.91■□□□□ 0.3
MEIS3P1A6NDR6 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MEIS3P1A6NDR6 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC16.91■□□□□ 0.3
MEIS3P1A6NDR6 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
MEIS3P1A6NDR6 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
MEIS3P1A6NDR6 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.91■□□□□ 0.3
MEIS3P1A6NDR6 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MEIS3P1A6NDR6 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MEIS3P1A6NDR6 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
MEIS3P1A6NDR6 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MEIS3P1A6NDR6 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MEIS3P1A6NDR6 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.91■□□□□ 0.3
MEIS3P1A6NDR6 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MEIS3P1A6NDR6 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.91■□□□□ 0.3
MEIS3P1A6NDR6 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
MEIS3P1A6NDR6 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MEIS3P1A6NDR6 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
MEIS3P1A6NDR6 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
MEIS3P1A6NDR6 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
MEIS3P1A6NDR6 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.9■□□□□ 0.3
MEIS3P1A6NDR6 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MEIS3P1A6NDR6 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MEIS3P1A6NDR6 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.9■□□□□ 0.3
MEIS3P1A6NDR6 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.9■□□□□ 0.3
MEIS3P1A6NDR6 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC16.9■□□□□ 0.3
MEIS3P1A6NDR6 AC010141.2-201ENST00000452426 721 ntBASIC16.9■□□□□ 0.3
MEIS3P1A6NDR6 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC16.9■□□□□ 0.3
MEIS3P1A6NDR6 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC16.9■□□□□ 0.3
MEIS3P1A6NDR6 MIR6084-201ENST00000622012 110 ntBASIC16.9■□□□□ 0.3
MEIS3P1A6NDR6 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MEIS3P1A6NDR6 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MEIS3P1A6NDR6 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
MEIS3P1A6NDR6 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MEIS3P1A6NDR6 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.9■□□□□ 0.3
MEIS3P1A6NDR6 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
MEIS3P1A6NDR6 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.9■□□□□ 0.3
MEIS3P1A6NDR6 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MEIS3P1A6NDR6 AC005082.1-201ENST00000413042 2259 ntBASIC16.9■□□□□ 0.3
MEIS3P1A6NDR6 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MEIS3P1A6NDR6 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.9■□□□□ 0.3
MEIS3P1A6NDR6 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
MEIS3P1A6NDR6 AC005332.8-201ENST00000622750 2735 ntBASIC16.9■□□□□ 0.3
MEIS3P1A6NDR6 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.9■□□□□ 0.3
MEIS3P1A6NDR6 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
MEIS3P1A6NDR6 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
MEIS3P1A6NDR6 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
MEIS3P1A6NDR6 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.89■□□□□ 0.3
MEIS3P1A6NDR6 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
MEIS3P1A6NDR6 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
MEIS3P1A6NDR6 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
MEIS3P1A6NDR6 LETM1P2-201ENST00000597330 2178 ntBASIC16.89■□□□□ 0.3
MEIS3P1A6NDR6 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
MEIS3P1A6NDR6 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.89■□□□□ 0.29
MEIS3P1A6NDR6 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
MEIS3P1A6NDR6 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
MEIS3P1A6NDR6 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
MEIS3P1A6NDR6 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.89■□□□□ 0.29
MEIS3P1A6NDR6 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
MEIS3P1A6NDR6 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MEIS3P1A6NDR6 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
MEIS3P1A6NDR6 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC16.89■□□□□ 0.29
MEIS3P1A6NDR6 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MEIS3P1A6NDR6 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MEIS3P1A6NDR6 LINC01465-201ENST00000408887 1940 ntBASIC16.89■□□□□ 0.29
MEIS3P1A6NDR6 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MEIS3P1A6NDR6 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MEIS3P1A6NDR6 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MEIS3P1A6NDR6 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
MEIS3P1A6NDR6 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MEIS3P1A6NDR6 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MEIS3P1A6NDR6 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MEIS3P1A6NDR6 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
MEIS3P1A6NDR6 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MEIS3P1A6NDR6 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
MEIS3P1A6NDR6 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MEIS3P1A6NDR6 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
MEIS3P1A6NDR6 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.89■□□□□ 0.29
MEIS3P1A6NDR6 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MEIS3P1A6NDR6 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms