Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNOT1A5YKK6 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CNOT1A5YKK6 AL845331.1-201ENST00000424978 1190 ntBASIC18.99■□□□□ 0.63
CNOT1A5YKK6 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.99■□□□□ 0.63
CNOT1A5YKK6 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.99■□□□□ 0.63
CNOT1A5YKK6 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.99■□□□□ 0.63
CNOT1A5YKK6 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CNOT1A5YKK6 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.99■□□□□ 0.63
CNOT1A5YKK6 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNOT1A5YKK6 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNOT1A5YKK6 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNOT1A5YKK6 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT1A5YKK6 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CNOT1A5YKK6 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT1A5YKK6 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT1A5YKK6 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT1A5YKK6 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT1A5YKK6 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.98■□□□□ 0.63
CNOT1A5YKK6 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.98■□□□□ 0.63
CNOT1A5YKK6 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.98■□□□□ 0.63
CNOT1A5YKK6 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT1A5YKK6 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT1A5YKK6 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CNOT1A5YKK6 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.98■□□□□ 0.63
CNOT1A5YKK6 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.98■□□□□ 0.63
CNOT1A5YKK6 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CNOT1A5YKK6 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT1A5YKK6 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CNOT1A5YKK6 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.98■□□□□ 0.63
CNOT1A5YKK6 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.97■□□□□ 0.63
CNOT1A5YKK6 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CNOT1A5YKK6 FAAHP1-202ENST00000446499 1238 ntBASIC18.97■□□□□ 0.63
CNOT1A5YKK6 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.97■□□□□ 0.63
CNOT1A5YKK6 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.97■□□□□ 0.63
CNOT1A5YKK6 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
CNOT1A5YKK6 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.97■□□□□ 0.63
CNOT1A5YKK6 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.97■□□□□ 0.63
CNOT1A5YKK6 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNOT1A5YKK6 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.97■□□□□ 0.63
CNOT1A5YKK6 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
CNOT1A5YKK6 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNOT1A5YKK6 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CNOT1A5YKK6 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNOT1A5YKK6 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNOT1A5YKK6 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CNOT1A5YKK6 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNOT1A5YKK6 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNOT1A5YKK6 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CNOT1A5YKK6 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.96■□□□□ 0.63
CNOT1A5YKK6 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CNOT1A5YKK6 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CNOT1A5YKK6 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNOT1A5YKK6 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.96■□□□□ 0.63
CNOT1A5YKK6 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CNOT1A5YKK6 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CNOT1A5YKK6 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.96■□□□□ 0.63
CNOT1A5YKK6 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.96■□□□□ 0.63
CNOT1A5YKK6 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.95■□□□□ 0.62
CNOT1A5YKK6 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNOT1A5YKK6 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.95■□□□□ 0.62
CNOT1A5YKK6 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.95■□□□□ 0.62
CNOT1A5YKK6 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.95■□□□□ 0.62
CNOT1A5YKK6 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.95■□□□□ 0.62
CNOT1A5YKK6 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNOT1A5YKK6 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNOT1A5YKK6 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNOT1A5YKK6 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CNOT1A5YKK6 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNOT1A5YKK6 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNOT1A5YKK6 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNOT1A5YKK6 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.95■□□□□ 0.62
CNOT1A5YKK6 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.95■□□□□ 0.62
CNOT1A5YKK6 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNOT1A5YKK6 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.94■□□□□ 0.62
CNOT1A5YKK6 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CNOT1A5YKK6 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CNOT1A5YKK6 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNOT1A5YKK6 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
CNOT1A5YKK6 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.94■□□□□ 0.62
CNOT1A5YKK6 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.94■□□□□ 0.62
CNOT1A5YKK6 Z85996.1-201ENST00000494644 937 ntBASIC18.94■□□□□ 0.62
CNOT1A5YKK6 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.94■□□□□ 0.62
CNOT1A5YKK6 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNOT1A5YKK6 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CNOT1A5YKK6 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC18.94■□□□□ 0.62
CNOT1A5YKK6 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNOT1A5YKK6 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CNOT1A5YKK6 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.94■□□□□ 0.62
CNOT1A5YKK6 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.93■□□□□ 0.62
CNOT1A5YKK6 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNOT1A5YKK6 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNOT1A5YKK6 KRT18P38-201ENST00000449496 1282 ntBASIC18.93■□□□□ 0.62
CNOT1A5YKK6 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.93■□□□□ 0.62
CNOT1A5YKK6 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNOT1A5YKK6 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CNOT1A5YKK6 AC011298.2-201ENST00000617989 482 ntBASIC18.93■□□□□ 0.62
CNOT1A5YKK6 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNOT1A5YKK6 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNOT1A5YKK6 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNOT1A5YKK6 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms