Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV3A0A0B4J244 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV3A0A0B4J244 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC15.9■□□□□ 0.14
TRAV3A0A0B4J244 C2orf69P4-201ENST00000565394 541 ntBASIC15.9■□□□□ 0.14
TRAV3A0A0B4J244 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV3A0A0B4J244 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV3A0A0B4J244 ANKRD20A6P-201ENST00000618763 204 ntBASIC15.9■□□□□ 0.14
TRAV3A0A0B4J244 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC15.9■□□□□ 0.14
TRAV3A0A0B4J244 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
TRAV3A0A0B4J244 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV3A0A0B4J244 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV3A0A0B4J244 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV3A0A0B4J244 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV3A0A0B4J244 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV3A0A0B4J244 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TRAV3A0A0B4J244 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
TRAV3A0A0B4J244 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV3A0A0B4J244 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV3A0A0B4J244 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV3A0A0B4J244 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAV3A0A0B4J244 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAV3A0A0B4J244 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV3A0A0B4J244 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAV3A0A0B4J244 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAV3A0A0B4J244 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV3A0A0B4J244 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV3A0A0B4J244 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV3A0A0B4J244 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV3A0A0B4J244 AP001271.2-201ENST00000624018 1556 ntBASIC15.89■□□□□ 0.13
TRAV3A0A0B4J244 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV3A0A0B4J244 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAV3A0A0B4J244 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV3A0A0B4J244 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAV3A0A0B4J244 HLA-G-202ENST00000376815 851 ntBASIC15.89■□□□□ 0.13
TRAV3A0A0B4J244 HLA-G-203ENST00000376818 1127 ntBASIC15.89■□□□□ 0.13
TRAV3A0A0B4J244 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV3A0A0B4J244 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
TRAV3A0A0B4J244 AC004911.1-201ENST00000416316 871 ntBASIC15.89■□□□□ 0.13
TRAV3A0A0B4J244 BRWD1-AS2-201ENST00000603064 1028 ntBASIC15.89■□□□□ 0.13
TRAV3A0A0B4J244 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
TRAV3A0A0B4J244 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV3A0A0B4J244 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV3A0A0B4J244 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAV3A0A0B4J244 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
TRAV3A0A0B4J244 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAV3A0A0B4J244 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV3A0A0B4J244 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAV3A0A0B4J244 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
TRAV3A0A0B4J244 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAV3A0A0B4J244 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV3A0A0B4J244 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV3A0A0B4J244 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV3A0A0B4J244 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV3A0A0B4J244 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV3A0A0B4J244 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV3A0A0B4J244 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TRAV3A0A0B4J244 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV3A0A0B4J244 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV3A0A0B4J244 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV3A0A0B4J244 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
TRAV3A0A0B4J244 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC15.88■□□□□ 0.13
TRAV3A0A0B4J244 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC15.88■□□□□ 0.13
TRAV3A0A0B4J244 AL589743.5-201ENST00000616611 1050 ntBASIC15.88■□□□□ 0.13
TRAV3A0A0B4J244 OR10C1-204ENST00000622521 1039 ntBASIC15.88■□□□□ 0.13
TRAV3A0A0B4J244 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAV3A0A0B4J244 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV3A0A0B4J244 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV3A0A0B4J244 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV3A0A0B4J244 Z82202.1-201ENST00000623446 1880 ntBASIC15.88■□□□□ 0.13
TRAV3A0A0B4J244 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV3A0A0B4J244 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAV3A0A0B4J244 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TRAV3A0A0B4J244 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV3A0A0B4J244 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV3A0A0B4J244 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV3A0A0B4J244 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC15.87■□□□□ 0.13
TRAV3A0A0B4J244 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
TRAV3A0A0B4J244 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC15.87■□□□□ 0.13
TRAV3A0A0B4J244 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV3A0A0B4J244 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV3A0A0B4J244 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV3A0A0B4J244 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
TRAV3A0A0B4J244 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV3A0A0B4J244 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV3A0A0B4J244 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC15.87■□□□□ 0.13
TRAV3A0A0B4J244 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TRAV3A0A0B4J244 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV3A0A0B4J244 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV3A0A0B4J244 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV3A0A0B4J244 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV3A0A0B4J244 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV3A0A0B4J244 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV3A0A0B4J244 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV3A0A0B4J244 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV3A0A0B4J244 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV3A0A0B4J244 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TRAV3A0A0B4J244 AC004408.2-201ENST00000623613 2777 ntBASIC15.87■□□□□ 0.13
TRAV3A0A0B4J244 PHGDH-210ENST00000641115 1638 ntBASIC15.86■□□□□ 0.13
TRAV3A0A0B4J244 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC15.86■□□□□ 0.13
TRAV3A0A0B4J244 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms