Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV13-1A0A0B4J241 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV13-1A0A0B4J241 AC105265.2-201ENST00000467189 838 ntBASIC13.77□□□□□ -0.21
TRAV13-1A0A0B4J241 STOX2-205ENST00000513034 807 ntTSL 3 BASIC13.77□□□□□ -0.21
TRAV13-1A0A0B4J241 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC13.77□□□□□ -0.21
TRAV13-1A0A0B4J241 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV13-1A0A0B4J241 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV13-1A0A0B4J241 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV13-1A0A0B4J241 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
TRAV13-1A0A0B4J241 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
TRAV13-1A0A0B4J241 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TRAV13-1A0A0B4J241 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC13.76□□□□□ -0.21
TRAV13-1A0A0B4J241 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV13-1A0A0B4J241 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV13-1A0A0B4J241 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
TRAV13-1A0A0B4J241 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV13-1A0A0B4J241 BX119927.1-201ENST00000636596 1552 ntBASIC13.76□□□□□ -0.21
TRAV13-1A0A0B4J241 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TRAV13-1A0A0B4J241 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV13-1A0A0B4J241 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV13-1A0A0B4J241 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
TRAV13-1A0A0B4J241 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV13-1A0A0B4J241 LINC02228-203ENST00000641970 1355 ntBASIC13.76□□□□□ -0.21
TRAV13-1A0A0B4J241 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
TRAV13-1A0A0B4J241 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TRAV13-1A0A0B4J241 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TRAV13-1A0A0B4J241 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV13-1A0A0B4J241 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV13-1A0A0B4J241 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC13.76□□□□□ -0.21
TRAV13-1A0A0B4J241 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV13-1A0A0B4J241 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV13-1A0A0B4J241 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TRAV13-1A0A0B4J241 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV13-1A0A0B4J241 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TRAV13-1A0A0B4J241 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV13-1A0A0B4J241 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV13-1A0A0B4J241 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV13-1A0A0B4J241 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV13-1A0A0B4J241 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV13-1A0A0B4J241 BX323043.1-201ENST00000641006 1765 ntBASIC13.76□□□□□ -0.21
TRAV13-1A0A0B4J241 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC13.76□□□□□ -0.21
TRAV13-1A0A0B4J241 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TRAV13-1A0A0B4J241 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV13-1A0A0B4J241 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC13.75□□□□□ -0.21
TRAV13-1A0A0B4J241 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC13.75□□□□□ -0.21
TRAV13-1A0A0B4J241 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV13-1A0A0B4J241 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV13-1A0A0B4J241 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV13-1A0A0B4J241 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC13.75□□□□□ -0.21
TRAV13-1A0A0B4J241 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC13.75□□□□□ -0.21
TRAV13-1A0A0B4J241 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV13-1A0A0B4J241 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
TRAV13-1A0A0B4J241 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TRAV13-1A0A0B4J241 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV13-1A0A0B4J241 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV13-1A0A0B4J241 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV13-1A0A0B4J241 HYI-206ENST00000372434 1025 ntTSL 5 BASIC13.75□□□□□ -0.21
TRAV13-1A0A0B4J241 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV13-1A0A0B4J241 SUDS3P1-201ENST00000505831 966 ntBASIC13.75□□□□□ -0.21
TRAV13-1A0A0B4J241 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC13.75□□□□□ -0.21
TRAV13-1A0A0B4J241 CCDC92B-201ENST00000575506 885 ntBASIC13.75□□□□□ -0.21
TRAV13-1A0A0B4J241 FGF8-207ENST00000618991 856 ntTSL 3 BASIC13.75□□□□□ -0.21
TRAV13-1A0A0B4J241 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV13-1A0A0B4J241 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV13-1A0A0B4J241 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV13-1A0A0B4J241 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV13-1A0A0B4J241 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC13.75□□□□□ -0.21
TRAV13-1A0A0B4J241 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV13-1A0A0B4J241 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC13.75□□□□□ -0.21
TRAV13-1A0A0B4J241 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC13.75□□□□□ -0.21
TRAV13-1A0A0B4J241 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV13-1A0A0B4J241 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
TRAV13-1A0A0B4J241 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
TRAV13-1A0A0B4J241 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV13-1A0A0B4J241 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV13-1A0A0B4J241 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV13-1A0A0B4J241 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC13.74□□□□□ -0.21
TRAV13-1A0A0B4J241 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC13.74□□□□□ -0.21
TRAV13-1A0A0B4J241 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV13-1A0A0B4J241 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV13-1A0A0B4J241 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV13-1A0A0B4J241 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV13-1A0A0B4J241 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV13-1A0A0B4J241 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV13-1A0A0B4J241 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV13-1A0A0B4J241 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC13.74□□□□□ -0.21
TRAV13-1A0A0B4J241 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
TRAV13-1A0A0B4J241 AC091799.1-201ENST00000422823 811 ntBASIC13.74□□□□□ -0.21
TRAV13-1A0A0B4J241 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC13.74□□□□□ -0.21
TRAV13-1A0A0B4J241 TESC-206ENST00000541210 936 ntTSL 3 BASIC13.74□□□□□ -0.21
TRAV13-1A0A0B4J241 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV13-1A0A0B4J241 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV13-1A0A0B4J241 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC13.74□□□□□ -0.21
TRAV13-1A0A0B4J241 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
TRAV13-1A0A0B4J241 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC13.74□□□□□ -0.21
TRAV13-1A0A0B4J241 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV13-1A0A0B4J241 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
TRAV13-1A0A0B4J241 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
TRAV13-1A0A0B4J241 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV13-1A0A0B4J241 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms