Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV18A0A075B6X5 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TRAV18A0A075B6X5 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV18A0A075B6X5 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV18A0A075B6X5 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV18A0A075B6X5 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV18A0A075B6X5 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
TRAV18A0A075B6X5 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV18A0A075B6X5 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV18A0A075B6X5 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV18A0A075B6X5 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV18A0A075B6X5 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV18A0A075B6X5 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV18A0A075B6X5 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV18A0A075B6X5 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.98■□□□□ 0.31
TRAV18A0A075B6X5 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV18A0A075B6X5 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAV18A0A075B6X5 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV18A0A075B6X5 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAV18A0A075B6X5 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV18A0A075B6X5 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAV18A0A075B6X5 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV18A0A075B6X5 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAV18A0A075B6X5 AC105265.2-201ENST00000467189 838 ntBASIC16.98■□□□□ 0.31
TRAV18A0A075B6X5 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAV18A0A075B6X5 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV18A0A075B6X5 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TRAV18A0A075B6X5 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
TRAV18A0A075B6X5 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV18A0A075B6X5 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
TRAV18A0A075B6X5 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV18A0A075B6X5 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV18A0A075B6X5 AC026471.1-201ENST00000564629 3026 ntBASIC16.98■□□□□ 0.31
TRAV18A0A075B6X5 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
TRAV18A0A075B6X5 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV18A0A075B6X5 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV18A0A075B6X5 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV18A0A075B6X5 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV18A0A075B6X5 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
TRAV18A0A075B6X5 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.97■□□□□ 0.31
TRAV18A0A075B6X5 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
TRAV18A0A075B6X5 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV18A0A075B6X5 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.97■□□□□ 0.31
TRAV18A0A075B6X5 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
TRAV18A0A075B6X5 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV18A0A075B6X5 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV18A0A075B6X5 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.97■□□□□ 0.31
TRAV18A0A075B6X5 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV18A0A075B6X5 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV18A0A075B6X5 EDA-201ENST00000338901 1233 ntBASIC16.97■□□□□ 0.31
TRAV18A0A075B6X5 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
TRAV18A0A075B6X5 AF213884.3-201ENST00000563833 479 ntBASIC16.97■□□□□ 0.31
TRAV18A0A075B6X5 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.97■□□□□ 0.31
TRAV18A0A075B6X5 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV18A0A075B6X5 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV18A0A075B6X5 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
TRAV18A0A075B6X5 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV18A0A075B6X5 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV18A0A075B6X5 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV18A0A075B6X5 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV18A0A075B6X5 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV18A0A075B6X5 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV18A0A075B6X5 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.97■□□□□ 0.31
TRAV18A0A075B6X5 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.96■□□□□ 0.31
TRAV18A0A075B6X5 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV18A0A075B6X5 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV18A0A075B6X5 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV18A0A075B6X5 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAV18A0A075B6X5 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV18A0A075B6X5 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV18A0A075B6X5 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV18A0A075B6X5 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.96■□□□□ 0.31
TRAV18A0A075B6X5 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
TRAV18A0A075B6X5 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV18A0A075B6X5 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV18A0A075B6X5 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV18A0A075B6X5 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV18A0A075B6X5 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV18A0A075B6X5 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV18A0A075B6X5 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.96■□□□□ 0.31
TRAV18A0A075B6X5 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TRAV18A0A075B6X5 AC096631.2-201ENST00000436136 790 ntBASIC16.96■□□□□ 0.31
TRAV18A0A075B6X5 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.96■□□□□ 0.31
TRAV18A0A075B6X5 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC16.96■□□□□ 0.31
TRAV18A0A075B6X5 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC16.96■□□□□ 0.31
TRAV18A0A075B6X5 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAV18A0A075B6X5 AP001160.3-201ENST00000601484 763 ntBASIC16.96■□□□□ 0.31
TRAV18A0A075B6X5 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV18A0A075B6X5 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TRAV18A0A075B6X5 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
TRAV18A0A075B6X5 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TRAV18A0A075B6X5 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV18A0A075B6X5 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV18A0A075B6X5 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
TRAV18A0A075B6X5 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
TRAV18A0A075B6X5 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV18A0A075B6X5 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV18A0A075B6X5 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV18A0A075B6X5 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV18A0A075B6X5 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms