Protein–RNA interactions for Protein: Q9BQS8

FYCO1, FYVE and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 1,478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1Q9BQS8 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
FYCO1Q9BQS8 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC9.28□□□□□ -0.92
FYCO1Q9BQS8 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
FYCO1Q9BQS8 OR2W4P-201ENST00000406496 926 ntBASIC9.28□□□□□ -0.92
FYCO1Q9BQS8 RN7SKP29-201ENST00000410957 272 ntBASIC9.28□□□□□ -0.92
FYCO1Q9BQS8 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC9.28□□□□□ -0.92
FYCO1Q9BQS8 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC9.28□□□□□ -0.92
FYCO1Q9BQS8 RN7SKP98-201ENST00000517070 156 ntBASIC9.28□□□□□ -0.92
FYCO1Q9BQS8 CYCSP22-201ENST00000517555 339 ntBASIC9.28□□□□□ -0.92
FYCO1Q9BQS8 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC9.28□□□□□ -0.92
FYCO1Q9BQS8 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC9.28□□□□□ -0.92
FYCO1Q9BQS8 AL049767.1-202ENST00000637826 242 ntBASIC9.28□□□□□ -0.92
FYCO1Q9BQS8 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
FYCO1Q9BQS8 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC9.27□□□□□ -0.92
FYCO1Q9BQS8 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
FYCO1Q9BQS8 TTC3P1-201ENST00000399586 6081 ntBASIC9.27□□□□□ -0.92
FYCO1Q9BQS8 AC027279.4-201ENST00000624371 2072 ntBASIC9.27□□□□□ -0.92
FYCO1Q9BQS8 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
FYCO1Q9BQS8 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
FYCO1Q9BQS8 CAST-222ENST00000508579 1758 ntTSL 2 BASIC9.27□□□□□ -0.93
FYCO1Q9BQS8 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
FYCO1Q9BQS8 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
FYCO1Q9BQS8 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
FYCO1Q9BQS8 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
FYCO1Q9BQS8 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
FYCO1Q9BQS8 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
FYCO1Q9BQS8 RNA5SP394-201ENST00000364216 119 ntBASIC9.27□□□□□ -0.93
FYCO1Q9BQS8 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
FYCO1Q9BQS8 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
FYCO1Q9BQS8 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC9.27□□□□□ -0.93
FYCO1Q9BQS8 AC015983.1-201ENST00000441577 373 ntBASIC9.27□□□□□ -0.93
FYCO1Q9BQS8 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC9.27□□□□□ -0.93
FYCO1Q9BQS8 AL136038.1-201ENST00000497246 351 ntBASIC9.27□□□□□ -0.93
FYCO1Q9BQS8 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
FYCO1Q9BQS8 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC9.27□□□□□ -0.93
FYCO1Q9BQS8 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC9.27□□□□□ -0.93
FYCO1Q9BQS8 CU639417.4-201ENST00000623928 207 ntBASIC9.27□□□□□ -0.93
FYCO1Q9BQS8 FBXL21-201ENST00000297158 1305 ntBASIC9.27□□□□□ -0.93
FYCO1Q9BQS8 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
FYCO1Q9BQS8 AL008638.3-201ENST00000623027 5182 ntBASIC9.26□□□□□ -0.93
FYCO1Q9BQS8 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
FYCO1Q9BQS8 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
FYCO1Q9BQS8 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
FYCO1Q9BQS8 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
FYCO1Q9BQS8 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
FYCO1Q9BQS8 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
FYCO1Q9BQS8 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC9.26□□□□□ -0.93
FYCO1Q9BQS8 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
FYCO1Q9BQS8 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
FYCO1Q9BQS8 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
FYCO1Q9BQS8 RNA5SP132-201ENST00000364725 118 ntBASIC9.26□□□□□ -0.93
FYCO1Q9BQS8 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
FYCO1Q9BQS8 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
FYCO1Q9BQS8 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC9.26□□□□□ -0.93
FYCO1Q9BQS8 MYL6P5-201ENST00000412707 459 ntBASIC9.26□□□□□ -0.93
FYCO1Q9BQS8 HMGA1P8-201ENST00000414130 321 ntBASIC9.26□□□□□ -0.93
FYCO1Q9BQS8 EIF4A1P6-201ENST00000448133 1210 ntBASIC9.26□□□□□ -0.93
FYCO1Q9BQS8 AL162739.1-201ENST00000450606 307 ntBASIC9.26□□□□□ -0.93
FYCO1Q9BQS8 RAB28P2-201ENST00000454299 641 ntBASIC9.26□□□□□ -0.93
FYCO1Q9BQS8 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
FYCO1Q9BQS8 AC008945.1-201ENST00000505144 499 ntBASIC9.26□□□□□ -0.93
FYCO1Q9BQS8 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC9.26□□□□□ -0.93
FYCO1Q9BQS8 SSX6-203ENST00000509958 336 ntTSL 3 BASIC9.26□□□□□ -0.93
FYCO1Q9BQS8 CYP4F27P-201ENST00000514557 494 ntBASIC9.26□□□□□ -0.93
FYCO1Q9BQS8 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC9.26□□□□□ -0.93
FYCO1Q9BQS8 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
FYCO1Q9BQS8 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
FYCO1Q9BQS8 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
FYCO1Q9BQS8 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC9.26□□□□□ -0.93
FYCO1Q9BQS8 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC9.26□□□□□ -0.93
FYCO1Q9BQS8 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
FYCO1Q9BQS8 FAM27E4-201ENST00000605259 342 ntBASIC9.26□□□□□ -0.93
FYCO1Q9BQS8 AC004836.1-201ENST00000623032 634 ntBASIC9.26□□□□□ -0.93
FYCO1Q9BQS8 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC9.26□□□□□ -0.93
FYCO1Q9BQS8 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
FYCO1Q9BQS8 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
FYCO1Q9BQS8 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC9.25□□□□□ -0.93
FYCO1Q9BQS8 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
FYCO1Q9BQS8 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
FYCO1Q9BQS8 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
FYCO1Q9BQS8 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
FYCO1Q9BQS8 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC9.25□□□□□ -0.93
FYCO1Q9BQS8 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
FYCO1Q9BQS8 AC002504.1-201ENST00000438281 691 ntBASIC9.25□□□□□ -0.93
FYCO1Q9BQS8 DNAJC19P5-201ENST00000443295 316 ntBASIC9.25□□□□□ -0.93
FYCO1Q9BQS8 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC9.25□□□□□ -0.93
FYCO1Q9BQS8 RPL36AP39-201ENST00000445859 318 ntBASIC9.25□□□□□ -0.93
FYCO1Q9BQS8 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC9.25□□□□□ -0.93
FYCO1Q9BQS8 RPL7L1P3-201ENST00000455249 689 ntBASIC9.25□□□□□ -0.93
FYCO1Q9BQS8 COPS8P2-201ENST00000473228 627 ntBASIC9.25□□□□□ -0.93
FYCO1Q9BQS8 OR7E157P-201ENST00000494376 911 ntBASIC9.25□□□□□ -0.93
FYCO1Q9BQS8 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC9.25□□□□□ -0.93
FYCO1Q9BQS8 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
FYCO1Q9BQS8 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC9.25□□□□□ -0.93
FYCO1Q9BQS8 AP001496.3-201ENST00000580230 913 ntBASIC9.25□□□□□ -0.93
FYCO1Q9BQS8 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC9.25□□□□□ -0.93
FYCO1Q9BQS8 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
FYCO1Q9BQS8 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
FYCO1Q9BQS8 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
FYCO1Q9BQS8 AC087565.3-203ENST00000641018 837 ntBASIC9.25□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms